Pairwise Alignments

Query, 254 a.a., branched chain amino acid ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  164 bits (416), Expect = 1e-45
 Identities = 97/250 (38%), Positives = 142/250 (56%), Gaps = 9/250 (3%)

Query: 4   IFEVSALQKNFGGLVVTNNVSLSLSPGDRTVLIGPNGAGKTTFVNLVTGNIKPSAGTVRI 63
           I +VS L   FGGL+  N V+L++       LIGPNGAGKTT  N +TG  KPS GT+ +
Sbjct: 5   ILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGTILL 64

Query: 64  AGEDVTSLSASQRVKRGLVRSFQVTRLFQDMTPEEHVALAILQREGKTGRIFGRY----- 118
            G+ +  L+  Q  ++G+VR+FQ  RLF++MT  E++ +A   R   T    G +     
Sbjct: 65  DGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIA-QHRHLNTNFFAGLFKTPSF 123

Query: 119 -RAMPSVMSEARDILGTLGLLALAETRVREIAYGQQRLIEIALAMALRPKILLLDEPAAG 177
            R+    M  A+  L  + L   A      +AYGQQR +EIA  M  +P+I++LDEPAAG
Sbjct: 124 RRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEPAAG 183

Query: 178 VPSTETARIEQ--ALDRLPADLAILMIEHDMDLVFRFARRVVVLAAGAVIFDGSPEDVTS 235
           +   ET  ++   A  R   ++ +L+IEHDM LV   +  +VV+  G  +  G+PE +  
Sbjct: 184 LNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQIRD 243

Query: 236 NAEVRQAYLG 245
           N +V +AYLG
Sbjct: 244 NPDVIKAYLG 253