Pairwise Alignments

Query, 270 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 269 a.a., 5-deoxy-glucuronate isomerase from Pseudomonas sp. RS175

 Score =  250 bits (639), Expect = 2e-71
 Identities = 130/268 (48%), Positives = 173/268 (64%), Gaps = 9/268 (3%)

Query: 3   SLLRKPVATSGKVHDITPQSADWGYVGFGLYRLKPGETATENTGDTEVILVLVEGKATIS 62
           SLL K  A+   V  + P   +  YVGF   RL  GET      D E+ LVL+ G+  + 
Sbjct: 2   SLLIKSQASGRTVVALPPGELE--YVGFTACRLSLGETLPVAAADKELCLVLLSGRIGLK 59

Query: 63  A-----GGKDFGELGDRMNVFERKPPHCVYVPAGSEWSLTATTDCTVGVCTAPGEKGSRE 117
                 G  D+  LGDR +VFE K P+  Y+P GS+  +TA +D  + VC APG  G+  
Sbjct: 60  GEAPGQGVFDWDNLGDRQSVFEDKSPYAAYLPPGSQALVTALSDVQLAVCAAPGSAGNEY 119

Query: 118 AQQ-IGPNGVQLTERGKGANTRYIFPIAMEERDVADSLLVTEVFTPSGNWSSYPPHRHDE 176
             + I P+ ++ + RGKGANTRY+  I + + + A SLLV EV TPSG+ SSYPPH+HD 
Sbjct: 120 GPRLILPDSMKRSVRGKGANTRYVCDI-LPDSEPAHSLLVVEVRTPSGHSSSYPPHKHDT 178

Query: 177 DNYPDMTYLEETYYHRLNPAQGFGFQRVFTEDGSLDETMAVSDGDVVLVPKGHHPCGAPY 236
           D+ P  ++LEETYYH+++P QGF FQRV+T+D S+D+ MAV + D+V+VPKG+HP   PY
Sbjct: 179 DDLPHQSFLEETYYHQISPPQGFVFQRVYTDDRSIDQAMAVENSDLVVVPKGYHPVSVPY 238

Query: 237 GYEMYYLNVMAGPMRKWRFKNHPDHDWI 264
           GYE YYLNVMAGP R W+F N P H W+
Sbjct: 239 GYESYYLNVMAGPKRVWQFHNDPQHSWL 266