Pairwise Alignments

Query, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 335 a.a., methionine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  307 bits (786), Expect = 3e-88
 Identities = 176/343 (51%), Positives = 228/343 (66%), Gaps = 10/343 (2%)

Query: 1   MVTFEGVTKTFGGADGKPGFAALAGIDYTVPKGSITCIIGRSGAGKSTLIRLANGLEKPS 60
           M+ F+ V KT+  A GK    AL     +V  G +  +IG SGAGKSTL+RL N LE+PS
Sbjct: 1   MIEFQNVHKTYRVA-GKD-IPALHSTSLSVENGQVFGLIGHSGAGKSTLLRLINRLEEPS 58

Query: 61  TGRVVVDGVDVAALDEKSLRTLRRSVGMIFQHFNLLSSRTAFDNVALPLEIAG-LGKKEI 119
            G++ VDG +V ALD   LR  R+ VGMIFQHFNLL+S+T  DNVALPL +AG L +KEI
Sbjct: 59  GGKITVDGEEVTALDANGLRRFRQQVGMIFQHFNLLASKTVADNVALPLTLAGELSRKEI 118

Query: 120 EARVAPLLDLVGLSDKAKRYPAELSGGQKQRVGIARALATQPKLLLSDEATSALDPETTQ 179
           + RVA LL  VGLSD AK+YPA+LSGGQKQRVGIARALAT+PK+LL DEATSALDP+TT 
Sbjct: 119 DQRVAELLARVGLSDHAKKYPAQLSGGQKQRVGIARALATKPKILLCDEATSALDPQTTA 178

Query: 180 SILELLKRINAELGLTVLLITHEMEVVKTIASQVAVIDRGLIVEEGTTFDIFTAPKHETT 239
           S+L+LL  IN EL LT++LITHEM+V++ +  QVAV+D G+IVE+G+  D+F  PKH TT
Sbjct: 179 SVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDAGVIVEQGSVADVFLHPKHPTT 238

Query: 240 RSLLSSSVGVKLPHWVTSGLKQEATDGDRVLVRLVFFGETAFQPLTARLVAEIGPDVNIL 299
           +  +  S  V       +  + +       +VRL F GE  + PL   +  E G D +IL
Sbjct: 239 KRFVQESEQVD-----ENEQRDDFAHVPGRIVRLTFQGEATYAPLLGTVARETGVDYSIL 293

Query: 300 AGTIEEISGQPFGSLVVSYPASAEVTARANRFYAETGLHTEVL 342
           AG I+ I   P+G L ++     ++ A   RF A   +H E+L
Sbjct: 294 AGRIDRIKDIPYGQLTLAV-TGGDMEAAFARFTA-ADVHMEIL 334