Pairwise Alignments

Query, 432 a.a., multidrug resistance efflux pump from Agrobacterium fabrum C58

Subject, 387 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  192 bits (488), Expect = 2e-53
 Identities = 113/352 (32%), Positives = 190/352 (53%), Gaps = 15/352 (4%)

Query: 76  AKKRSPLLPIFALALLVGAGWYGYNWWIDGRFMVSTDDAYIQGDIAVIAPKVAGYVAKVN 135
           A+ +  L   FAL  ++   + G+ W+  GRF  STD+AY+QG+I  I+ ++   +  V 
Sbjct: 39  AQLKRRLTLFFALVAIIALAFLGH-WYFKGRFYESTDNAYVQGEITRISSQLGARIETVP 97

Query: 136 VVENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRIDAQIIGGEAAQEQAVAQK 195
           V +NQ V  GD LV L+  D+ +A E+A A + T +    +  +++    +      AQ 
Sbjct: 98  VEDNQHVSKGDLLVRLEAADFELAVERARAALATREAEYAQAQSRLTQQGSLIAAGQAQL 157

Query: 196 GALDAALRGAEITQKRATELQA------KDVGTVAASDN-AQVALDQARANVVAGEAAIS 248
            A  A    + +   RA +L+       + V T++A  + A   +D+ARA++ +    ++
Sbjct: 158 AATQATFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVAGSQVDKARADLQSQRQQVT 217

Query: 249 SAKANVELLRAQREEAESTIRSLQLSKDKAARDLAFTVLKAPYDGVIGNLAVQTGDLVSV 308
           +  A ++ L AQ   A + +   +L+  +         + AP  G IG    + G +V  
Sbjct: 218 ALNAELKRLDAQIANARTDLAQAELNLTRCE-------IHAPISGTIGQRNARNGQVVQA 270

Query: 309 GKRLASLVPMNELYIDANFKETQLARVVPGSKVRVHVDAFDDEAIEGTVQSISPGSGSVF 368
           G  L S+VP  ++++ ANFKETQ+ R+ PG +  +  D++ D  IEG V S+   SG+ F
Sbjct: 271 GAYLLSIVPDEDIWVQANFKETQIGRMHPGQRAELLFDSYPDTPIEGRVDSLFAASGAQF 330

Query: 369 SMLPPENATGNFTKVIQRVPVRIVFSKEDLAKHNLRAGLSVVVDVDTRTAPE 420
           S+LPP+NATGNFTKV+QR+P+++ F  ++     +R G+SV   VD R+  E
Sbjct: 331 SLLPPDNATGNFTKVVQRIPIKLTFHADNPLHGRIRPGMSVTATVDLRSEDE 382