Pairwise Alignments

Query, 432 a.a., multidrug resistance efflux pump from Agrobacterium fabrum C58

Subject, 367 a.a., HlyD family secretion protein from Paraburkholderia sabiae LMG 24235

 Score =  218 bits (556), Expect = 2e-61
 Identities = 128/363 (35%), Positives = 204/363 (56%), Gaps = 1/363 (0%)

Query: 63  PQATPAPAVAAPKAKKRSPLLPIFALALLVGAGWYGYNWWIDGRFMVSTDDAYIQGDIAV 122
           P   P     A K  +  P + +  ++++V        W+  GRF+ +TDDAY+ GD+ V
Sbjct: 5   PSIAPPAVAGAAKQTRSIPWMRLAVISVIVVVAAAVSYWFFVGRFVETTDDAYVGGDVTV 64

Query: 123 IAPKVAGYVAKVNVVENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRIDAQII 182
           +APKV G+V  V V +NQ VKAG  L+ LD  DY     QA+A++ + + S+  ++A+  
Sbjct: 65  LAPKVNGFVDDVLVQDNQYVKAGQVLIRLDSRDYDARLAQANAEVASAEASVTELEAKKS 124

Query: 183 GGEAAQEQAVAQKGALDAALRGAEITQKRATELQAKDVGTVAASDNAQVALDQARANVVA 242
              A   +  A+  A +A L  +     R  +L   D  +    + A   L +A A+V  
Sbjct: 125 LQLATINEQSAEVRASNAELTRSASDSVRYRQLVKDDAVSNQVVERADADLAKAHASVDR 184

Query: 243 GEAAISSAKANVELLRAQREEAESTIRSLQLSKDKAARDLAFTVLKAPYDGVIGNLAVQT 302
             AA+++A+  + +L AQ  +A + + +   ++  AA ++ +T ++AP DG +GN   + 
Sbjct: 185 SSAALTAAQRQLSVLDAQINDAHARVATAVAAQRVAALNVEYTTIRAPIDGYVGNRTARV 244

Query: 303 GDLVSVGKRLASLVPMNELYIDANFKETQLARVVPGSKVRVHVDAFDDEAIEGTVQSISP 362
           G L ++G  L ++VP + L+IDANFKE QL ++  G  V V +DA     IEG V+S++P
Sbjct: 245 GVLANIGVSLLTVVPASGLWIDANFKEDQLKKMKVGDTVDVDLDA-SSRRIEGVVESLAP 303

Query: 363 GSGSVFSMLPPENATGNFTKVIQRVPVRIVFSKEDLAKHNLRAGLSVVVDVDTRTAPENT 422
            +G+ FS+LP ENATGNFTK++QRVPVR+  +     +  LR GLS  V V  R   ++T
Sbjct: 304 ATGATFSVLPAENATGNFTKIVQRVPVRVRLTVPKDMQGVLRPGLSATVKVHLRADGDHT 363

Query: 423 RTA 425
            +A
Sbjct: 364 SSA 366