Pairwise Alignments

Query, 253 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 250 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  348 bits (893), Expect = e-101
 Identities = 178/244 (72%), Positives = 204/244 (83%), Gaps = 1/244 (0%)

Query: 1   MESVLPLLSDPAAWVALVTLIVMEVVLGIDNLIFISILTNKLPPEQREKARKIGIGLALI 60
           M+ +L L + P AWVAL TLIVME+VLGIDNLIFISILTNKLP + R KAR+IGI +AL+
Sbjct: 1   MDYLLQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALV 60

Query: 61  MRLGLLGTVAWIVQLTTPVFEIFGHAFSWKDMILIAGGLFLMWKATKEIHHNVDPE-DHK 119
           +RLGLL T+A+IVQLT PVFE+FG AFSWKDMILIAGGLFL+WKAT EIHH++DPE + K
Sbjct: 61  LRLGLLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEK 120

Query: 120 EDMVGGPVAMNFGAAIGQILLLDLVFSVDSIITAVGMTPHLPIMIVAVVFAVAVMLLAAT 179
           E   G  VA+ F AAIGQILLLDLVFS+DSIITAVGMT HLPIMI+AVV +V VML+AA 
Sbjct: 121 ETSAGNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAE 180

Query: 180 PLANFIERNPTIVMLALAFLMMIGTTLIAEGMGFHVPKGYVYAAMAFSALVELLNMLARN 239
           PLA FI  NPT+VMLAL FL+MIG TLIAEG G HVPKGYVYAAMAFSA +E LN+  RN
Sbjct: 181 PLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLNIARRN 240

Query: 240 ARQR 243
             +R
Sbjct: 241 RHKR 244