Pairwise Alignments

Query, 253 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 250 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  352 bits (903), Expect = e-102
 Identities = 181/247 (73%), Positives = 206/247 (83%), Gaps = 1/247 (0%)

Query: 1   MESVLPLLSDPAAWVALVTLIVMEVVLGIDNLIFISILTNKLPPEQREKARKIGIGLALI 60
           ME +L L + P AWVAL TL+ MEVVLGIDNLIFISILTNKLP E R KAR+IGI +AL+
Sbjct: 1   MEYLLELAASPTAWVALATLVAMEVVLGIDNLIFISILTNKLPVEYRSKARRIGISMALV 60

Query: 61  MRLGLLGTVAWIVQLTTPVFEIFGHAFSWKDMILIAGGLFLMWKATKEIHHNVDPEDHKE 120
           MRL LL TVAWIVQLT PVFE+FG+AFSWKD+ILIAGGLFL+WKATKEIH NVDP   KE
Sbjct: 61  MRLALLSTVAWIVQLTDPVFEVFGNAFSWKDVILIAGGLFLLWKATKEIHENVDPHGAKE 120

Query: 121 D-MVGGPVAMNFGAAIGQILLLDLVFSVDSIITAVGMTPHLPIMIVAVVFAVAVMLLAAT 179
           +  V   V + F AAI QILLLD+VFSVDSIITAVGMT HLPIMI+AV+ AV VM++AA 
Sbjct: 121 EAKVSSTVTLGFAAAIFQILLLDIVFSVDSIITAVGMTEHLPIMIIAVITAVIVMMVAAD 180

Query: 180 PLANFIERNPTIVMLALAFLMMIGTTLIAEGMGFHVPKGYVYAAMAFSALVELLNMLARN 239
           PLANFI  NPT+VMLAL FL+MIG TLIAEG G HVPKGYVYAAMAFS  +E+LN+LAR 
Sbjct: 181 PLANFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSTAIEVLNILARR 240

Query: 240 ARQRKKA 246
           AR +++A
Sbjct: 241 ARLKREA 247