Pairwise Alignments

Query, 332 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 380 a.a., carbohydrate ABC transporter ATP-binding protein, CUT1 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  334 bits (856), Expect = 2e-96
 Identities = 176/354 (49%), Positives = 231/354 (65%), Gaps = 25/354 (7%)

Query: 4   ISLQNVSKLFGEAKVIPSIDLDINDGEFVVFVGPSGCGKSTLLRLIAGLEDVSGGKIVID 63
           + L N++K  G  +++  + L+I  GEFVVFVGPSGCGKSTLLRLIAGL+ +  G ++ID
Sbjct: 3   LKLDNINKQLGGTRILRDVSLEIAAGEFVVFVGPSGCGKSTLLRLIAGLDSICAGDLLID 62

Query: 64  GNDATEKAPAERGLAMVFQSYALYPHMSVRNNIAFPLKMAKLDKAVIDKKVEDAARILNL 123
           G    +  P ERG+ MVFQSYALYPHMSV +NI+F LK+AK +K+ + ++V   A+IL L
Sbjct: 63  GRRVNDLEPRERGVGMVFQSYALYPHMSVYDNISFGLKLAKTEKSSLRERVLKTAQILQL 122

Query: 124 TDYLERRPSQLSGGQRQRVAIGRAIVREPKAFLFDEPLSNLDAALRGTMRLEISELHNTL 183
              L+R+P +LSGGQRQRVA+GRA+ REP   LFDEPLSNLDA+LR  MR EI+ LH  L
Sbjct: 123 DKLLQRKPRELSGGQRQRVAMGRAMAREPDILLFDEPLSNLDASLRVQMRNEIARLHKRL 182

Query: 184 KTTMIYVTHDQVEAMTMADKIVVLNRGNIEQVGSPMQLYKTPRNLFVAGFIGSPRMNLIT 243
            +TMIYVTHDQVEAMT+ADKIVVLN G +EQVGSP +LY+ P +LFVAGF+GSPRMN + 
Sbjct: 183 GSTMIYVTHDQVEAMTLADKIVVLNGGQVEQVGSPRELYERPASLFVAGFLGSPRMNFLP 242

Query: 244 GDFAR-------------------------QKGATTAGVRPEHLVLSKESGLWQGKVTVA 278
                                         +    T GVRPEH+ L+  +      V+  
Sbjct: 243 VSLQAPGRSSLIDIPALGMKSLPFDSSNLTEDAQLTLGVRPEHITLNAANNGVGVTVSGV 302

Query: 279 EHLGSDTFLHLEVSGIGPITARTDGEFECKHGDTVFITPDDTKIHRFDDKGIAI 332
           E+LGS+ ++HL      P+  R D +   + GD V +  DD+ +H FD  G+A+
Sbjct: 303 EYLGSEVYVHLATGASEPLICRCDAKAGWQVGDQVALQFDDSNLHLFDADGLAL 356