Pairwise Alignments

Query, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 4e-50
 Identities = 96/261 (36%), Positives = 146/261 (55%)

Query: 12  IGIAVTSFLVAVALLSLVWTPLSPTKIQIVQKLKSPLVYGGLGTDHFGRDVLSMLMAGAW 71
           IGI +   +V VAL + +  P  P +  I  +L+ P     LGTD +GRDVLS L+ G  
Sbjct: 27  IGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVLSRLIYGTR 86

Query: 72  NSLSTAIAAVAIGALIGTAIGVTVAALRGFTETVVMRICDIIFAVPPILSAMMLGAFIGT 131
            SL     AV I  ++G+A+GV    + G T+ ++    D++ + P +L  +M+ A +G 
Sbjct: 87  VSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGA 146

Query: 132 GRFTAIIAIATFMVPVFARLTLGAALQIWAREYITAATSIGQNRAKITLFHIVPNISNQI 191
                IIAIA   +  F R+     + +  R+++ A  S+G    ++   HI+PN+ +++
Sbjct: 147 SLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEV 206

Query: 192 IVQVTIQLGLAILTEAGLSFLGLGMPPPAATWGRMLADAQTYLGAAPWLAIMPGLAIALA 251
           +V   + +  AI TEA LSF+GLG+PPPA TWG M+ +    +  A WL + P LAI L 
Sbjct: 207 LVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLT 266

Query: 252 VFGLNLLGDGLRDLLDPRDTS 272
           V  L+LLGD LRD  DP+  S
Sbjct: 267 VLALSLLGDALRDANDPKTRS 287