Pairwise Alignments

Query, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 303 a.a., predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  187 bits (476), Expect = 2e-52
 Identities = 105/269 (39%), Positives = 152/269 (56%), Gaps = 1/269 (0%)

Query: 2   RLLRRRPAFVIGIAVTSFLVAVALLSLVWTPLSPTKIQIVQKLKS-PLVYGGLGTDHFGR 60
           R  RR+   +        L+ VA+ +    P           L + P +    G D  GR
Sbjct: 32  RRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGR 91

Query: 61  DVLSMLMAGAWNSLSTAIAAVAIGALIGTAIGVTVAALRGFTETVVMRICDIIFAVPPIL 120
           D+ S ++ GA  SL+  + AV IGA IGT +G+      G+ + ++MRICD++FA P IL
Sbjct: 92  DIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGIL 151

Query: 121 SAMMLGAFIGTGRFTAIIAIATFMVPVFARLTLGAALQIWAREYITAATSIGQNRAKITL 180
            A+ + A +G+G    IIA+A F +P FARL  G  L +  + +I +A SIG +   + L
Sbjct: 152 LAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLL 211

Query: 181 FHIVPNISNQIIVQVTIQLGLAILTEAGLSFLGLGMPPPAATWGRMLADAQTYLGAAPWL 240
            HI+P   + I+V  T+++G +I++ A LSFLGLG  PP   WG ML +A+  +  AP +
Sbjct: 212 RHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHV 271

Query: 241 AIMPGLAIALAVFGLNLLGDGLRDLLDPR 269
           A+ P LAI L V   NLLGDGLRD LDP+
Sbjct: 272 AVFPALAIFLTVLAFNLLGDGLRDALDPK 300