Pairwise Alignments

Query, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 301 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  168 bits (425), Expect = 1e-46
 Identities = 99/258 (38%), Positives = 140/258 (54%)

Query: 5   RRRPAFVIGIAVTSFLVAVALLSLVWTPLSPTKIQIVQKLKSPLVYGGLGTDHFGRDVLS 64
           RR   F  G A+   +V + +++   +P +P +  +  +L +P     LGTDH GRDVLS
Sbjct: 34  RRHWTFYAGSAIFLAIVLLLVIAPWISPYNPAQQNLRLRLNAPSATYWLGTDHLGRDVLS 93

Query: 65  MLMAGAWNSLSTAIAAVAIGALIGTAIGVTVAALRGFTETVVMRICDIIFAVPPILSAMM 124
            L+ G   +++ A   V +   IGT IG+     RG  + V+MR+ D++ A+P ++ A+ 
Sbjct: 94  RLLIGGRFTVTIAAITVILSVGIGTFIGIISGRSRGILDEVLMRVVDLLIAIPDVVIAIF 153

Query: 125 LGAFIGTGRFTAIIAIATFMVPVFARLTLGAALQIWAREYITAATSIGQNRAKITLFHIV 184
           L A  G G  T I ++       FARL  G  L I +REYI AA  +G  R  I   HI+
Sbjct: 154 LVAIFGPGYGTLIASLTIVGWTPFARLARGLTLAINSREYIRAAEVLGCTRRFIIFRHII 213

Query: 185 PNISNQIIVQVTIQLGLAILTEAGLSFLGLGMPPPAATWGRMLADAQTYLGAAPWLAIMP 244
           PN    I     ++ G  ++T  GLSFLGLG+ PPAA W  ML+DAQ Y    P L I P
Sbjct: 214 PNTIWPIAAVAFLRFGHKLITVGGLSFLGLGVQPPAADWALMLSDAQAYAERMPILVIAP 273

Query: 245 GLAIALAVFGLNLLGDGL 262
           GLAI L+   +  +G GL
Sbjct: 274 GLAIFLSALSVTWIGHGL 291