Pairwise Alignments

Query, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 6e-62
 Identities = 124/333 (37%), Positives = 190/333 (57%), Gaps = 21/333 (6%)

Query: 1   MLAVLIRRLVSLIITLFAVSLIIYVVMGLLPGDPAAIMLGTS-ASPDTLAALQKQMGLDQ 59
           ML+ + RRL  LI T F ++L+ + ++ L+PGDP  +M+G     P+  A   +++GL++
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 60  PLPLRYLHWLAGVFRGDLGQSYTYGVPVAGLIIERLAVTLPLALLAIFLSVTIAIPLGVA 119
           PLP++YL ++  + +GDLG+S      V    +     TL LA  A+  +  + +  GV 
Sbjct: 61  PLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVI 120

Query: 120 AAQNRNGALDFAAGLFSHVGIAVPGFWVGLLLIIVFSTTLGWMPSGG------------- 166
           AA  R    D      S  G ++P FW GL+LI+ FS +LGW P  G             
Sbjct: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTG 180

Query: 167 -------FPGWSPSFSAGLVALVLPAIALALSQAGVLTRVCRSAVLEVMNEDFVRTARAK 219
                        +F   ++ L+LPAI L      V+ R+ RS++LEV+ ED++RTARAK
Sbjct: 181 FMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAK 240

Query: 220 GLSERVALWRHAVPNAMIPVVTMIGLQFTFLIAGAVLVENVFNLPGLGRLAYQALTQRDI 279
           GLS    ++ H + NA+IPV+T+ GLQ   L+AGAVL E +F+ PG+G+   +A+  RD 
Sbjct: 241 GLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY 300

Query: 280 VVMQSVVLFFSALVIIMNFVVDIAYLFIDPRLR 312
            V+Q+ +L  + LVI++NFVVDI Y   +PR+R
Sbjct: 301 PVVQNGILLIACLVILVNFVVDILYGLANPRIR 333