Pairwise Alignments

Query, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Dickeya dianthicola ME23

 Score =  230 bits (586), Expect = 4e-65
 Identities = 131/336 (38%), Positives = 192/336 (57%), Gaps = 24/336 (7%)

Query: 1   MLAVLIRRLVSLIITLFAVSLIIYVVMGLLPGDPAAIMLGTSA-SPDTLAALQKQMGLDQ 59
           ML  ++RRL  +I T   ++L+ +  + L+PGDP  IM G    SP+  A L  ++GLD+
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERGISPERHAQLMAELGLDK 60

Query: 60  PLPLRYLHWLAGVFRGDLGQSYTYGVPVAGLIIERLAVTLPLALLAIFLSVTIAIPLGVA 119
           PL  +YLH++ GV  GDLG S    +PV    + R   TL L + A+  +V + IP+GV 
Sbjct: 61  PLWDQYLHYINGVLHGDLGMSLKSRIPVWDEFVPRFKATLELGVCAMIFAVIVGIPVGVL 120

Query: 120 AAQNRNGALDFAAGLFSHVGIAVPGFWVGLLLIIVFSTTLGWMPSGGFPG---------- 169
           AA  R    D  A   +  G ++P FW G++LI++ S  L   P  G  G          
Sbjct: 121 AAVKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDALP 180

Query: 170 -----------WSPS--FSAGLVALVLPAIALALSQAGVLTRVCRSAVLEVMNEDFVRTA 216
                      W     F   ++ +VLPA+ L      V+ R+ RSA+LEV+ ED++RTA
Sbjct: 181 LSGFMLIDTLIWGADGDFKDAVMHMVLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIRTA 240

Query: 217 RAKGLSERVALWRHAVPNAMIPVVTMIGLQFTFLIAGAVLVENVFNLPGLGRLAYQALTQ 276
           RAKGLS    +  HA+ NAM+PVVT+IGLQ   ++AGA+L E +F+ PGLGR    AL +
Sbjct: 241 RAKGLSRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 277 RDIVVMQSVVLFFSALVIIMNFVVDIAYLFIDPRLR 312
           RD  V+QS VL  + ++I++N +VD+ Y  ++PR+R
Sbjct: 301 RDYPVVQSGVLLVATMIILVNLLVDLLYGVVNPRIR 336