Pairwise Alignments

Query, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  226 bits (575), Expect = 7e-64
 Identities = 129/320 (40%), Positives = 193/320 (60%), Gaps = 9/320 (2%)

Query: 1   MLAVLIRRLVSLIITLFAVSLIIYVVMGLLPGDPAAIMLGTSASPDTLAALQKQMGLDQP 60
           ML  +I+RL + ++ + +V+LI +++  L  GDP  +M+G   S +  AAL++++GL+  
Sbjct: 1   MLVFIIKRLGNAVLVMLSVALIAFLIFRLA-GDPVELMVGEQTSQEDRAALRERLGLNDS 59

Query: 61  LPLRYLHWLAGVFRGDLGQSYTYGVPVAGLIIERLAVTLPLALLAIFLSVTIAIPLGVAA 120
           LP +YL ++    +G+ G SY  G  V  LI ER   TL L L+A  +S+ + +PLGV  
Sbjct: 60  LPTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLGVLT 119

Query: 121 AQNRNGALDFAAGLFSHVGIAVPGFWVGLLLIIVFSTTLGWMPSGG------FPGWSPSF 174
           A  R           S VG+++P F VG+LLI+VFS +LGW P+ G         WS   
Sbjct: 120 AIRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWSTGL 179

Query: 175 --SAGLVALVLPAIALALSQAGVLTRVCRSAVLEVMNEDFVRTARAKGLSERVALWRHAV 232
             S+G  AL+LPAIAL+L Q  ++ R+ R+ +LEV+  DFV+ ARA+G+      +RHA+
Sbjct: 180 LTSSGRAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFRHAL 239

Query: 233 PNAMIPVVTMIGLQFTFLIAGAVLVENVFNLPGLGRLAYQALTQRDIVVMQSVVLFFSAL 292
            N ++PVVT+  +    LIA A++ E VF  PG+G L  QA+T  DI VM + +   S +
Sbjct: 240 RNCLMPVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCIISFI 299

Query: 293 VIIMNFVVDIAYLFIDPRLR 312
            +++N  VDIAY  IDPRLR
Sbjct: 300 FVVLNTFVDIAYAVIDPRLR 319