Pairwise Alignments

Query, 249 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  180 bits (457), Expect = 3e-50
 Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 15/235 (6%)

Query: 1   MSTVLSIRDMVVDFD-------GYI---ALDSVSVDVAEGESFGIVGESGSGKSTLLRAI 50
           M+ VLS R++   ++       G+    AL+ VS ++  G++  +VGESG GKSTL RA+
Sbjct: 1   MAVVLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60

Query: 51  AGLNHFDEGSLMVAGRSY--SSKHRDKSFYSDVQMVFQDPYGSLHPRQTVDALLLEPLVI 108
             +     GSL +AG     +SK   K    DVQMVFQ PY SL+PRQ +   L EPL+I
Sbjct: 61  TLIEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLI 120

Query: 109 H---GLDNREQRIARALDEVGLGSGFRFRYSHQLSGGQRQRIAIARALIVEPKILLLDEP 165
           +       R  ++ + +++VGL      RY H  SGGQRQRIA+ARA++++PK+L+ DEP
Sbjct: 121 NTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEP 180

Query: 166 TSALDASIQAEILNLLEQARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEM 220
           TSALD SIQA++LNL    +K+ N  +V +SH+L V+ H+ D++ VM  G+  EM
Sbjct: 181 TSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEM 235