Pairwise Alignments

Query, 249 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 630 a.a., ABC transporter, nucleotide binding/ATPase protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  179 bits (455), Expect = 9e-50
 Identities = 104/233 (44%), Positives = 144/233 (61%), Gaps = 10/233 (4%)

Query: 19  ALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGLNHFDEGSLMVAGRS-----YSSKHR 73
           A++SVS ++  GE  G+VGESGSGK+T+ + +      DEGS+            ++K  
Sbjct: 337 AVNSVSFEICRGECLGLVGESGSGKTTVSKILMRAVRPDEGSITFHRPEGDIDVLNAKDG 396

Query: 74  D-KSFYSDVQMVFQDPYGSLHPRQTVDALLLEPLVIHGLDN---REQRIARALDEVGLGS 129
           D K   S +QMVFQDP  SL PR TV  +L EPL IHG  +   R +++   +  +GLG 
Sbjct: 397 DLKELRSKIQMVFQDPISSLSPRMTVGNILSEPLEIHGRGDAKYRAEKVRGLVRAIGLGE 456

Query: 130 GFRFRYSHQLSGGQRQRIAIARALIVEPKILLLDEPTSALDASIQAEILNLLEQARKDRN 189
               RY H  SGGQRQRI IARAL + P++L+ DEP SALD S+QA+ILNLL+  ++D  
Sbjct: 457 SALNRYPHSFSGGQRQRIGIARALALGPELLICDEPVSALDVSVQAQILNLLKDLQQDLG 516

Query: 190 LTFVMVSHDLGVISHMCDRLAVMKSGKVVEMLEAGALESREFTADYTRQLLVA 242
           LT++ +SH+L V+ +M DR+AVM  G++VE+     L  R     YT+ LL A
Sbjct: 517 LTYLFISHNLAVVDYMADRVAVMCEGRIVELAPREIL-MRSPIHPYTKSLLAA 568



 Score =  114 bits (285), Expect = 5e-30
 Identities = 77/235 (32%), Positives = 122/235 (51%), Gaps = 34/235 (14%)

Query: 19  ALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGLNH---------------------FD 57
           A+   S+ +  G+   +VGESGSGKS + + I G++                       D
Sbjct: 26  AVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPKTARVNGRVLFTDPENAAAGPID 85

Query: 58  EGSLMVAGRSYSSKHRDKSFYSDVQMVFQDPYGSLHPRQTVDALLLEPLVIHGL---DNR 114
              L   GR   S   ++     + ++FQ+P  S  P  T+   + E L IH +     R
Sbjct: 86  LLQLPKDGREIRSIRGNR-----IGLIFQEPMTSFSPLHTIGNQIDEALRIHSILSPAER 140

Query: 115 EQRIARALDEVGLGSGFRF--RYSHQLSGGQRQRIAIARALIVEPKILLLDEPTSALDAS 172
            +++   LD VG     +    Y  +LSGG RQR  IA ALI  P +L+ DEPT+ALD +
Sbjct: 141 AEKMYETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIAMALICRPALLIADEPTTALDVT 200

Query: 173 IQAEILNLLEQARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEMLEAGALE 227
           IQA+IL LL   +   N++ ++++HDLGV++++ D +AV+  G   E++EAG ++
Sbjct: 201 IQAQILKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIYQG---EIMEAGTVD 252