Pairwise Alignments

Query, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  238 bits (608), Expect = 1e-67
 Identities = 116/276 (42%), Positives = 178/276 (64%), Gaps = 2/276 (0%)

Query: 35  IWRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPPGTAGYLLGTDD 94
           +W+   +NRL+ +G+ +++ ++ VALFA ++AP++P+Q ++  A  L P +A + LGTD 
Sbjct: 15  LWQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNI--AYRLEPPSAEFWLGTDT 72

Query: 95  QGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIFLAFP 154
            GRD+LSRLI+G+R++L V  +  +IA  +G  +G ++GY GG  D ++    D+ L+FP
Sbjct: 73  YGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFP 132

Query: 155 KLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGASPFR 214
            L+L L + A LG  +EN ++AIA+T   P+ RIARA T+  +  DF+ A + +G  P R
Sbjct: 133 TLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGR 192

Query: 215 IVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRFILDQ 274
           ++  H++P  +S ++V   L MA  I T A L F+GLG  PP P WG+MI  G   ILD 
Sbjct: 193 LMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDA 252

Query: 275 WWVAAMPGIAILIVSLGFNLLGDGLRDALDPKEANQ 310
           WW+   P +AIL+  L  +LLGD LRDA DPK  ++
Sbjct: 253 WWLTVFPSLAILLTVLALSLLGDALRDANDPKTRSE 288