Pairwise Alignments

Query, 545 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 512 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  145 bits (366), Expect = 4e-39
 Identities = 133/536 (24%), Positives = 232/536 (43%), Gaps = 53/536 (9%)

Query: 20  LMMLSAPHAFAATPADTLVEGFAIDDII--------TLDPGEAFELSAAEVTGNTYSKLV 71
           L+  S   A AA PA      FA  D++        TLDP +A +  +  V  + Y  L 
Sbjct: 10  LLAASVTAALAAAPA------FAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLF 63

Query: 72  SIDLNDTSKVIGDLAESWTTSEDGLTYTFKLKSGLKFASGNPITADDVAFSFERAVKLDK 131
            +D     K +  LAE +T SEDGL YT KL++G+KF  G    A+ V  + +RA     
Sbjct: 64  GLDKEMKLKNV--LAEGYTVSEDGLVYTIKLRTGVKFQDGTDFNAEAVKVNLDRA----S 117

Query: 132 SPAFLLTQFGLKGDNVNEKAKAADANTFVLTVDKPYAPSFVLNVLTATVAAVVDKKLITE 191
           +P   L ++ L  +  +   +  D  T  +T+ +P+  S  +N+L     A++       
Sbjct: 118 NPENSLKRYNLYKNIAS--TEVVDPATVKITLKEPF--SAFINILAHPATAMI------- 166

Query: 192 KAKSVTPSADYKYDTDFGNEFLKTGYAGSGPYKILGWKANEAVILEANPNYYGEK-PKLK 250
                +P+A  KY  + G   +     G+GPY++L W   + V ++    Y+ +  PKL 
Sbjct: 167 -----SPAALKKYGKEIGFHPV-----GTGPYELLTWNQTDFVKVKKFAGYWQQGLPKLD 216

Query: 251 RVVYRHMKESSGQRLALENGDIDVARNLEPGDMEAVSKKEGLAVTSAPKGTVYYFSLNQK 310
            + +R + +++ +   L+ G+   A  +       + K   L + ++P     Y S+N  
Sbjct: 217 TITWRPVVDNNTRAAMLQTGEAQFAFPIPYEQAAILQKNSKLELVASPSIMQRYISMNVT 276

Query: 311 NENLKKPEVVEALKYLVDYDAIGATIIKGIGEVHQTFLPKGQLGALDENPYKLDVAKAKE 370
            +    P+V EA+ Y ++  A+      G        LP     A    P+  D AKA+E
Sbjct: 277 QKPFDNPKVREAINYAINRQALVKVAFAGYATPATGVLPPAIAYAQSYQPWPYDPAKARE 336

Query: 371 LLAKAGLKDGFTVTM-DVRNTQPVTGIAESVQQTLAQAGIKLEIIPGDGKQTLTKYRART 429
           LL +AG  +GF+ T+    N      + +  QQ LAQ GIK+++   D  Q   +   + 
Sbjct: 337 LLKEAGFPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKVQVTAMDAGQRAAEVEGKG 396

Query: 430 HDIYIGQWGSDYFDPNSNAETFTINYDNS----DEGKNKTLAWRNAWDVPDLTKETQSAL 485
                 + G   F     A T   ++  S     +    TL     +  P + K+   AL
Sbjct: 397 QK----ESGVRMFYTGWTASTGEADWALSPLFASQNWPPTLFNTAFYSNPQVDKDLADAL 452

Query: 486 LEKDTAKRAAIYQNLQKEVLAKGPFVIIFQQTEVAGYSAKLKGLKLGPSFDTNYVY 541
                 ++  +Y++ Q  +  + P+V +  +  V+ ++  L G  + P  DT + +
Sbjct: 453 KTTKPEEKVRLYKDAQDIIWKESPWVPLVVEKLVSAHNKALTGFYIMP--DTGFSF 506