Pairwise Alignments

Query, 545 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 531 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  408 bits (1049), Expect = e-118
 Identities = 214/512 (41%), Positives = 304/512 (59%), Gaps = 11/512 (2%)

Query: 20  LMMLSAPHAFAATPADTLVEGFAIDDIITLDPGEAFELSAAEVTGNTYSKLVSIDLNDTS 79
           L  L+   AFA TP   LV    +D++ +LDP E FE    E+ GN Y +LV  +  +  
Sbjct: 17  LSWLNLNTAFADTPPSMLVMAMQLDNMTSLDPQEGFEAVGTEIIGNLYQRLVMPNPANPQ 76

Query: 80  KVIGDLAESWTTSEDGLTYTFKLKSGLKFASGNPITADDVAFSFERAVKLDKSPAFLLTQ 139
           +VIGDL+ SW    DG T+TF L    +FA G+P+TA+D AFS +RAVKLDKSPAF++ Q
Sbjct: 77  EVIGDLSVSWAVGNDGKTFTFHLNPKARFADGSPVTAEDAAFSLQRAVKLDKSPAFIINQ 136

Query: 140 FGLKGDNVNEKAKAADANTFVLTVDKPYAPSFVLNVLTATVAAVVDKKLITEKAKSVTPS 199
           FG   DNV +   A D NT V+ +DKP A +F+L  L+A V ++V KK      ++    
Sbjct: 137 FGFTKDNVEQHITAPDDNTLVINLDKPAAETFLLYCLSAPVGSIVQKKAALANQQN---- 192

Query: 200 ADYKYDTDFGNEFLKTGYAGSGPYKILGWKANEAVILEANPNYYGEKPKLKRVVYRHMKE 259
                  D GN++LK   AGSGP+ ++ WKA+E++IL+ N ++  +    KRV+ +H+ +
Sbjct: 193 ------NDLGNQWLKQNSAGSGPFSLVSWKASESIILQKNDHFPADNA-FKRVLLKHIVD 245

Query: 260 SSGQRLALENGDIDVARNLEPGDMEAVSKKEGLAVTSAPKGTVYYFSLNQKNENLKKPEV 319
            S Q L L+ GD+DVARNL    +  +       +      +V   S N  NE LKKP+V
Sbjct: 246 PSAQLLMLQKGDVDVARNLTTEQIRPLVNDGNYHLVRQSIASVMLLSCNTANEFLKKPQV 305

Query: 320 VEALKYLVDYDAIGATIIKGIGEVHQTFLPKGQLGALDENPYKLDVAKAKELLAKAGLKD 379
            +A+K+ +DYD I   I+    +VHQ+FLP G   ALD+ P+ LDVAKAK LL  AG  D
Sbjct: 306 WQAIKWALDYDGIQKNILPLTHKVHQSFLPGGFPAALDDTPFHLDVAKAKALLKDAGYPD 365

Query: 380 GFTVTMDVRNTQPVTGIAESVQQTLAQAGIKLEIIPGDGKQTLTKYRARTHDIYIGQWGS 439
           GF +T+D  + QP   IA+++Q  L   GI+++++  + +Q LTK RAR   + +  WG+
Sbjct: 366 GFDITLDHYSAQPYPDIAQAIQTQLGAIGIRVKLVAAENRQVLTKMRARQQQLALTAWGA 425

Query: 440 DYFDPNSNAETFTINYDNSDEGKNKTLAWRNAWDVPDLTKETQSALLEKDTAKRAAIYQN 499
           DYFDPNSNAE F IN DNSD  +N+TLAWR  W      + T+ AL E+D AKR A+Y+ 
Sbjct: 426 DYFDPNSNAEAFCINTDNSDGARNRTLAWRCGWSDEKFNQLTEQALHEQDPAKRIALYET 485

Query: 500 LQKEVLAKGPFVIIFQQTEVAGYSAKLKGLKL 531
           LQ+      PF ++ Q  +       L G+ +
Sbjct: 486 LQRNHRELSPFTLMMQDEKTLACRKNLSGVTM 517