Pairwise Alignments

Query, 275 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

Subject, 305 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  153 bits (386), Expect = 5e-42
 Identities = 84/247 (34%), Positives = 142/247 (57%), Gaps = 3/247 (1%)

Query: 13  LPAAIFAAAVFLVPVFMLLSEG-FRTTDGWTLSAYAAFFSDPLNQTVFLRTLKLGALVTV 71
           LPA +F    F  P+  LL  G    T G  L  Y   F++     V   T  +  +VT+
Sbjct: 41  LPALLFLGVFFFAPLVGLLLRGVLEPTPG--LGNYEQLFANSAYARVLFNTFSVAGVVTL 98

Query: 72  VSAVVGYAAAFAIINLSPGKKGHVVNLVVLPLMISPVARTYAWIVILGRTGIVNQALQAV 131
           +S ++G+  A+AI  +  G    ++N+V+L +  S +ARTY+W+V+L  +G++N+AL A+
Sbjct: 99  ISVLLGFPLAWAITLVPKGWGRWLLNIVLLSMWTSLLARTYSWLVLLQSSGVINKALMAM 158

Query: 132 GLSDAPIRILFSETAVFIGLLQLFLPLMIISLISALENMPKDTIAAARVLGANWFQVFWK 191
           G+ DAP+ ++ + T V IG+  + +P +++ L + +  +    + A  + GA+ +  FWK
Sbjct: 159 GIIDAPLEMVHNLTGVVIGMSYIMIPFIVLPLQATMHAIDPMVLQAGSICGASPWTNFWK 218

Query: 192 VILPLTKEGLVVGGTLVFTGSLTAYITPAILGGSKVLMLETLLYQQVTVSNNFVAASVIA 251
           V LPL + GL  G  +VF  SL  Y+TPA+LGG++ +ML   + QQV    N+  AS  A
Sbjct: 219 VFLPLCRSGLFSGALMVFVMSLGYYVTPALLGGAQNMMLPEFIIQQVQSFLNWGLASAAA 278

Query: 252 FILIVMS 258
            +L+ ++
Sbjct: 279 ALLVAIT 285