Pairwise Alignments

Query, 275 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

Subject, 300 a.a., ABC transporter membrane spanning protein (mannopine) from Agrobacterium fabrum C58

 Score =  152 bits (383), Expect = 1e-41
 Identities = 88/264 (33%), Positives = 148/264 (56%), Gaps = 3/264 (1%)

Query: 4   NRAEALALALPAAIFAAAVFLVPVFMLLSEGFRTTDGWTLSAYAAFFSDPLNQTVFLRTL 63
           + A AL L LPAA+     F+ P+  L++    +    +L  Y   F DPL   V   T 
Sbjct: 28  SHAGALLLLLPAALMLLTGFVYPLARLVA---LSMPDMSLELYIRIFRDPLYLNVLFSTT 84

Query: 64  KLGALVTVVSAVVGYAAAFAIINLSPGKKGHVVNLVVLPLMISPVARTYAWIVILGRTGI 123
            +   V     ++G+  A A++ L       +   V++PL  S + R+YAWIV+L RTGI
Sbjct: 85  VVALAVMCCCLLLGFPVANAMVRLKHPWTLILTGCVLIPLWTSVLVRSYAWIVLLQRTGI 144

Query: 124 VNQALQAVGLSDAPIRILFSETAVFIGLLQLFLPLMIISLISALENMPKDTIAAARVLGA 183
           +NQAL +  L D P+R+++++ AV + +  + LP MI+ + +AL  +P + + AA  LG+
Sbjct: 145 INQALLSTKLIDEPLRMIYTQGAVIVAMTHVLLPFMIMPIFAALRAIPPEYVQAAMNLGS 204

Query: 184 NWFQVFWKVILPLTKEGLVVGGTLVFTGSLTAYITPAILGGSKVLMLETLLYQQVTVSNN 243
                F  +I+PL+  G+  G  + F  +L  Y+TPA++GG+  LM+ TL+ QQ TV  +
Sbjct: 205 TRLHAFRAIIVPLSLPGIFAGCVISFVLALGFYVTPALVGGAGSLMVATLIGQQTTVLLD 264

Query: 244 FVAASVIAFILIVMSFAANILLKR 267
           +  A+ ++  L+V++ A  I+ +R
Sbjct: 265 WPFAAALSTSLLVVTLAVVIIFRR 288