Pairwise Alignments

Query, 353 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 354 a.a., santhopine-responsive transcriptional repressor from Agrobacterium fabrum C58

 Score =  114 bits (284), Expect = 5e-30
 Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 22/325 (6%)

Query: 3   SSRPATNLSAIAAALGVSVATVSNALSGKGRVSPDLVERIRKTASELGYVPSSAGRALRT 62
           S  P+  ++ +A   GVS AT +  L G G VS  + E +   AS L Y P+   R++ T
Sbjct: 6   SKSPSVTVADVARRAGVSKATAARVLGGYGTVSDRVREAVTAAASSLDYRPNELARSMTT 65

Query: 63  GRSGVLGLVLPDIANPLFPQIAQAIEKAAVSAGYGVLIADARGEIAMQTDAINRLIERGV 122
           GRSG +G+V+ DI NP F    + I   A  AG+ V++ ++  + A +  AI  L+ + V
Sbjct: 66  GRSGTIGVVVGDIENPFFSLAVRGITDVARQAGFTVILINSGEDAAAEKAAIRTLLAKRV 125

Query: 123 DGMIIVPRRGTRISGV------DCPVAIID--SPSTPGNTVAADHWDGGRQVGDYLASLG 174
           DG+I+ P +   +  +        P+A++D  S +   +TV AD       V   L +LG
Sbjct: 126 DGLIVSPAKENDVEHLHEVIRSGLPLALLDRGSDTLEVDTVLADDRYTAENVTSRLIALG 185

Query: 175 HRKVVLV-----GKNRDSNVQNDRLGGIRDGL-GKACVTRTLWIDSIEEADGAGC----- 223
           HR++  +       +R    Q+   G +R  + G   V R      +E+    G      
Sbjct: 186 HRRIAYLTACDTPDHRFRTPQDISTGSVRRRIEGYLAVCREAGFIGMEDWVKVGAVTPER 245

Query: 224 --RLGLADLVADGF-TAFAAISDLHALRALTELQREGIEVPEEASVTGFDDLIFSAVVTP 280
             R+ +  L +    TA  A   +  L      +  G+ +P + S+  F D  +++V TP
Sbjct: 246 THRIVIETLQSGHRPTAIIASDSIIGLEVFKAHRELGLNIPGDLSLVSFHDADWTSVTTP 305

Query: 281 PLTTMRMDMGRIADLAVGALLRAID 305
           P+T +R  +  +   A   L+  ++
Sbjct: 306 PVTVVRQPVYELGATAARLLVERLN 330