Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  250 bits (638), Expect = 7e-71
 Identities = 144/399 (36%), Positives = 223/399 (55%), Gaps = 8/399 (2%)

Query: 27  GVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRID 86
           G+FG WA    +  AV   G + V+   K VQH  GG+V EL  RDGD VK GD ++ +D
Sbjct: 36  GIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLVKKGDPLIVLD 95

Query: 87  ATMTRANLAIVVKSLDQFTARKARLEGERD---RAASVVFPQSLRDRAGDAEVLAMMNAE 143
            +   A        L     ++ARL  ERD      SV+   +  DRA +A     +  E
Sbjct: 96  ESQLSAEYESTRNQLIVARYKEARLRAERDGLDSIPSVIMEGTDSDRAQEA-----LAGE 150

Query: 144 QRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSLQERG 203
           Q++++ R      +     +R++Q++ +I+GL                E+ + + L   G
Sbjct: 151 QQVFKARHDSLLGEISVNRERIQQMQQQIAGLNDMIRTKAGLNKSYSGEIKQLKELLAEG 210

Query: 204 LLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSDLREM 263
            +D  RL   ER+   +  ++   ++ I   + +I ET LQI+Q+ +++  +V  +L ++
Sbjct: 211 FVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLKKKFDADVAKELSDV 270

Query: 264 DARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVDKLV 323
            A++ +  E+  A  D+L RV I AP+ G+V  + VHT+GGV++    ++ IVP    LV
Sbjct: 271 QAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAATPLLDIVPAQSDLV 330

Query: 324 VEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYYLVRV 383
           VEAKVAP+DID++  G+  ++RFSAFNQ TTP I G + RISAD  V++R+G  YYLVRV
Sbjct: 331 VEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEGKLTRISADSLVEERSGDQYYLVRV 390

Query: 384 ATSQEQIKRLGEFSLMPGMPVEAFITTGERSVLSYFLKP 422
             +++ +K+LG   L PGMP E  I  G+R++L Y LKP
Sbjct: 391 KVTEDGMKKLGNRKLQPGMPAEVLINAGDRTMLQYLLKP 429