Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 437 a.a., HlyD family type I secretion periplasmic adaptor subunit from Pseudomonas fluorescens SBW25

 Score =  212 bits (539), Expect = 2e-59
 Identities = 127/407 (31%), Positives = 213/407 (52%), Gaps = 3/407 (0%)

Query: 23  LTLTGVFGG--WAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGD 80
           LTL G  G   WA    +   +  QG++VV    K VQ    GVVS ++V++G+ VK G 
Sbjct: 25  LTLVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSPGVVSRILVKEGEHVKQGQ 84

Query: 81  VVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRAGDAEVLAMM 140
            + R+D T  +A++  +        A  AR + ERD  AS+ FP  L      A  L ++
Sbjct: 85  PLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDNHASIRFPAELSANPDPALAL-VL 143

Query: 141 NAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSLQ 200
             +++L+  RR     ++  +   +     ++ G+   R+    +   + ++L   + L 
Sbjct: 144 EGQRQLFSSRREAFAREQAGIRANIDGASAQLGGMRRARSDLTAQAQSLRDQLSNLQPLA 203

Query: 201 ERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSDL 260
           + G + ++RL   +RQ + +  D+ +       +E  I E+ L++ Q  E++ +EV S L
Sbjct: 204 DNGYIPRNRLMEYQRQLSQVQQDLAQNSGESGRVEQGILESRLKLQQHSEEYQKEVRSQL 263

Query: 261 REMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVD 320
            +   R     ++  +A   L+  +I AP DG+   L+VHT G V+  GE ++ IVP+  
Sbjct: 264 ADAQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLSVHTEGAVVRAGETLLEIVPQGT 323

Query: 321 KLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYYL 380
           +L VE  +    +D++      ++ F+AFNQ  TP + G V  ISAD  +D++TGA YY+
Sbjct: 324 RLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGEVSLISADQMLDEKTGAPYYV 383

Query: 381 VRVATSQEQIKRLGEFSLMPGMPVEAFITTGERSVLSYFLKPLLDQA 427
           +R   S   +++L    + PGMP E F+ TGERS+L+Y  KPLLD+A
Sbjct: 384 LRTTVSDAALEKLHGLVIKPGMPAEMFVRTGERSLLNYLFKPLLDRA 430