Pairwise Alignments

Query, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

Subject, 282 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 2/149 (1%)

Query: 286 ILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLR 345
           +++P  G++  + V    G I+PG  ++ I P  DKL++EA+V  QD+  +  GQ   + 
Sbjct: 134 VVSPVRGIIRYILVDAATGQISPGRTLVEITPLDDKLLIEARVRLQDMAFLRPGQEAMMT 193

Query: 346 FSAFNQKTTPEITGTVERISADVTVDQRTGASYYLVRVATSQEQIKRLGE-FSLMPGMPV 404
           F+A++  T   + G +++IS D+  DQ  G S+YLVR+ T +  +  + +   ++PGM  
Sbjct: 194 FTAYDDITFGGLKGYIDQISQDMATDQ-AGNSFYLVRLRTEKNYLGNIDKPLLILPGMAA 252

Query: 405 EAFITTGERSVLSYFLKPLLDQANRTFRQ 433
              I TG +++LSY LKP+        R+
Sbjct: 253 HVNIITGRKTLLSYLLKPIRQARAEALRE 281



 Score = 37.7 bits (86), Expect = 4e-07
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 31  GWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRID 86
           GWA   EI   V A G  + ++   +VQ    G +S++ +R+G  V  GD +MR++
Sbjct: 56  GWASVAEIDEVVQATGKTLSQSQRYRVQAQEAGELSDIYIREGQIVNIGDPLMRLE 111