Pairwise Alignments

Query, 583 a.a., bacteriocin ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

 Score =  217 bits (552), Expect = 2e-60
 Identities = 169/550 (30%), Positives = 263/550 (47%), Gaps = 30/550 (5%)

Query: 29  LMSALVNILYLTGSLFMMEVYDRVLPSRSLPTLVALFAIAAVLYAFQGLFDAIRGRLLVR 88
           + S + N+L L G LF M+VYDRV+P+ SLPTL  LF    V+ A   +FD     L ++
Sbjct: 181 IASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFG--GVVLAL--VFDFSMRLLRLK 236

Query: 89  ISDRLDQVLSTKVYDAVIGLQLRLPVS------GRQAQPLRDLDTIRSFLSGSGPTALFD 142
           ++D L +    +V D V G  LRL  S      G     LR+L++IR  ++ S  T L D
Sbjct: 237 VTDLLGKRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLAD 296

Query: 143 LPWLPFYIAICFAFHFWL--GVTALAGAAILTVFTLMTELVSRRPVEEA---AQHASRRN 197
           LP+      + F F FWL  GV        L    L   L  RR    A    + ++ RN
Sbjct: 297 LPFF-----LLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRN 351

Query: 198 RLIEATRRNADIIAVMGMASPLRDRWQTDNRAYVREQRSASDIASGFGVASKVLRMLLQS 257
            ++  + +  D I  +   +    +W   N A          + +G    ++ ++  + +
Sbjct: 352 AMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFA 411

Query: 258 GILAVGAWLVINEQATPGIIIAGSILSARALAPVDL---AIANWKGFIAARQSRYRLEKT 314
            ++ +GA +VI    T G ++A S+LS+R +AP+      +  W+    A Q   +L ++
Sbjct: 412 VVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQS 471

Query: 315 LALLPDAAMRLDLPAPQALLSVERVNAIPPEATEPVLQDIAFTLAAGSGLGVIGASGSGK 374
               P+   R+ LPA      + + N    E   PVL      +  G  + V+G +G+GK
Sbjct: 472 PVDHPEGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGK 531

Query: 375 SSLARLLVGLWRPVKGAIRLDGATLDQWPPEALARHIGYMPQMIELLDGTIAENIASFDR 434
           S+L + L G    V+G I LDG  +    P  L R +G +PQ   L  GT+ EN+     
Sbjct: 532 STLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAG 591

Query: 435 QASPEKIIAAARAARIHDLVVSLPDGYSTDVGETGRQLSAGQKQRIALARALYGDPFLVV 494
           QAS ++++AA  A    D V  LP G    + E G  LS GQ+Q + L+R L   P +++
Sbjct: 592 QASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLL 651

Query: 495 LDEPNSNLDSEGEDALTAAILGIRER---GGVAIVIAHRPSALLAMDKVLMLADGRQQAF 551
           LDEP ++LD    D     +L   ER   G   ++  HR S L  +D++L+L  GR    
Sbjct: 652 LDEPTASLD----DMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIVID 707

Query: 552 GAKEEVLAKV 561
            A++  LAK+
Sbjct: 708 DARDAALAKL 717