Pairwise Alignments

Query, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  149 bits (375), Expect = 1e-40
 Identities = 103/315 (32%), Positives = 161/315 (51%), Gaps = 7/315 (2%)

Query: 6   LQLKTIITDPLTIAIGASAFLLLVGELLSPGFAQGSQIVRLLTIAAILGIVAAGQNLVIL 65
           L L  ++  P          + LV  L S  F   S +  +    +I  I+A G   VIL
Sbjct: 21  LNLARLVRSPAFYPFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVIL 80

Query: 66  GGREGIDLSVGAMISL-GAVLAGNMMNGQNAGIPLAILVAGGIPFLIGLINGLGITFVRI 124
            G  GIDLSVG +++L G + AG M+ G   G+ +   +  G+ F IG  NGL + ++ +
Sbjct: 81  TG--GIDLSVGPVMALSGTLTAGLMVAGLPPGLAIGAGMLIGVAFGIG--NGLFVAYLHM 136

Query: 125 PPLVMTLGMTAVIQGGLVVYSQGVPSGAAAPLLAGFINRPLIFGIPGVLFVWLGIAAIML 184
           PP+++TL    + +G  ++Y+ G P        A F  R  +FGI   + + L    +  
Sbjct: 137 PPIIVTLATMGIARGLGLMYTDGYPISGLPDWFA-FFGRESLFGIQVPILIMLLTYLVAY 195

Query: 185 FVLRRTAFGFAIYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYTGTSFI 244
            +L+ T  G  IYAIG NE A  L G+     + L+YG+SGL A + G+ +     +   
Sbjct: 196 VLLQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQP 255

Query: 245 SVGDQYVLPSIIAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNLDVWARQII-F 303
           + G  + L +I AVV+GG S+AGG G  VGT+ GA+ L +L + L  L +  + + +I  
Sbjct: 256 NAGVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKG 315

Query: 304 GVTLLALMLLYGRQK 318
           G+ LLA+ +   R K
Sbjct: 316 GIILLAIFISRQRHK 330