Pairwise Alignments

Query, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 355 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  150 bits (380), Expect = 3e-41
 Identities = 104/317 (32%), Positives = 171/317 (53%), Gaps = 23/317 (7%)

Query: 24  AFLLLVG--ELLSPGFAQGSQIVRLLTIAAILGIVAAGQNLVILGGREGIDLSVGAMISL 81
           A LL+V    L+ P F   S ++ +    AI G++A G  LVIL G  GIDLSVGA+  +
Sbjct: 19  ALLLVVAFFSLMVPNFLTASNLLIMTQHVAITGLLAIGMTLVILTG--GIDLSVGAVAGI 76

Query: 82  GAVLAGNMMN------GQNA---GIPLAILVAGGIPFLIGLINGLGITFVRIPPLVMTLG 132
             ++AG ++       G N     +P  ILV   +  LIGL+NG+ IT + + P + TLG
Sbjct: 77  CGMVAGALLTNGIPLWGGNTLFLNVPEVILVVSVLGMLIGLVNGVVITRLVVAPFICTLG 136

Query: 133 MTAVIQGGLVVYSQG--VPSGAAAPLLAG----FINRPLIFGIPGVLFVWLGIAAIML-- 184
           M  V +G  ++++ G    +    P L      F+    + GI   L +WL +A ++L  
Sbjct: 137 MMYVARGVALLFNDGGTYANLNGMPALGNTGFAFLGSGTLLGI--YLPIWLMLAFLLLGL 194

Query: 185 FVLRRTAFGFAIYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYTGTSFI 244
           ++ R+T  G  IYAIG NE AA L G+P+  ++  +Y  SGL A L G+ V     T+  
Sbjct: 195 YLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVASQLQTAHP 254

Query: 245 SVGDQYVLPSIIAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNLDVWARQIIFG 304
             G+ + + +I A V+GGT+LAGG G   G++ GA  +  L   ++ + +  + + +I G
Sbjct: 255 MTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMVIKG 314

Query: 305 VTLLALMLLYGRQKQLR 321
           + ++  +++   Q++L+
Sbjct: 315 LVIVTAVVIDQFQQRLQ 331