Pairwise Alignments

Query, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 332 a.a., Ribose import binding protein RbsB from Xanthobacter sp. DMC5

 Score = 90.1 bits (222), Expect = 7e-23
 Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 8/241 (3%)

Query: 5   LMAAAAMVLAAGTSVHAQEQSFKIGLSNSFVGSEWRTQMIEEAQAAAKAWGEKGVKVEVV 64
           L+AAA  V    T   A +++  +   N      ++T  +  A+AAAK+ G K V     
Sbjct: 10  LIAAALPVALLSTGALAADETIAVFTKNQ-TNPYFQTVRVG-AEAAAKSMGAKVVHY--- 64

Query: 65  VQSGNVDVQGQIGHIRNFMNQGVDAILINPGSPTAFDPIFAQAKARNILVI-ATDAEVSS 123
           + +    +  Q+  I + + +   AI+  P    A  P   Q     I V+  TD     
Sbjct: 65  IPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNVTDRSAGG 124

Query: 124 KDALYVGIDQKAWAAQSAQWLADALKGKGSVVAINGIAGNPANEARVAGYREVFKKYPDI 183
           K   +VG D  +   ++ ++L   + GKG+VV + G+ G+  N  RV G+ +  K+  D+
Sbjct: 125 KFLAFVGADDYSLGLETGRYLLKEMGGKGNVVILEGVKGSLTNIDRVRGFTDAIKENKDV 184

Query: 184 KVLNEANASWDQAQGQQAMQNLLATYPDISGVW-VQDGMADGAWRAIEAAG-KTKDIAAT 241
           K+L    A++ + QG Q M+NL+ ++P I GV    D MA GA  A++ A  K K I   
Sbjct: 185 KLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGANRKAKVIGIN 244

Query: 242 G 242
           G
Sbjct: 245 G 245