Pairwise Alignments

Query, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  110 bits (276), Expect = 4e-29
 Identities = 90/286 (31%), Positives = 140/286 (48%), Gaps = 14/286 (4%)

Query: 8   AAAMVLAAGTSVHAQEQSFKIGLSNSFVGSEWRTQMIEEAQAAAKAWGEKGVKVEVVVQS 67
           AA  +LA   ++ A  +++K+G +   +  ++    + E +        K   V++ V  
Sbjct: 11  AALSLLACSIAMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAV---KDGTVQLTVFD 67

Query: 68  GNVDVQGQIGHIRNFMNQGVDAILINPGSPTAFDPIFAQAKARNILVIATDAEVSSKDAL 127
           GN D   Q   I N + Q  DAIL  P    A       A + +++VIA++ +V+     
Sbjct: 68  GNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVADASVP 127

Query: 128 YVGIDQKAWAAQSAQWLADALKGKGSVVAINGIAGNPANEARVAGYREVFKKYPDIKVLN 187
           YVG D        AQ + D L GKG+VV I G  G  A   R  G  EV  K+PDIK++ 
Sbjct: 128 YVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGELEVLGKHPDIKIIE 187

Query: 188 EANASWDQAQGQQAMQNLLATYP-DISGVWVQ-DGMADGAWRAIEAAGKT-KDIAATG-E 243
           +  A+WD+AQ     ++ L  +P  I+GV  Q D MA GA +A+++ G T KD+  T  +
Sbjct: 188 KKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSHGLTSKDVPVTSID 247

Query: 244 IRKDFMTRWEKEK---FNSGASVNPPGVMASALNVAVLKLQGKEFK 286
              D +   +K++   F   A     G    AL+VA+  L GK++K
Sbjct: 248 GMPDAIQAAKKDEVTTFLQDAQAQSQG----ALDVALRALAGKDYK 289