Pairwise Alignments

Query, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 447 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 7/222 (3%)

Query: 17  TSVHAQEQSFKIGLSNSFVGSEWRTQMIEEAQAAAKAWGEKGVKVEVVVQSGNVDVQGQI 76
           T+   +E  F IG +N+   S WR  M     AAA+   ++ V   V+V+  + D + QI
Sbjct: 114 TARFRREPPFVIGFANASSSSPWRVAMARSLMAAAQR--QRDVVSRVMVRDAHDDPRRQI 171

Query: 77  GHIRNFMNQGVDAILINPGSPTAFDPIFAQAK--ARNILVIATDAEVSSKDAL--YVGID 132
             +     + +D  +++  +    + + A     A+ I VI  D      + +  +V   
Sbjct: 172 EQLAEMREERMDLCILSAAASDHPELLAAVRGLGAQGIPVIGVDRICGEPEDMVSFVTAS 231

Query: 133 QKAWAAQSAQWLADALKGKGSVVAINGIAGNPANEARVAGYREVFKKYPDIKVLNEANAS 192
                  SA WL + L G+G ++ + G         R+    E+   +P I+V+     +
Sbjct: 232 DVLVGRMSALWLVEYLGGRGRILMLCGREDASPCRLRLQAAMEILGLHPKIEVVAIEFTN 291

Query: 193 WDQAQGQQAMQNLLATYPDISGVWVQDGMAD-GAWRAIEAAG 233
           W+ + G + +Q  LA      GVW   G+   G+ RA   AG
Sbjct: 292 WEASLGHEIVQRHLAAGTKFDGVWCDSGLQGVGSLRAFTEAG 333