Pairwise Alignments

Query, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 321 a.a., Galactofuranose ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 17/244 (6%)

Query: 6   MAAAAMVLAAGTSVHAQEQSFKIGLSNSFVGSEWRTQMIEEAQAAAKAWGEKGVKVEVVV 65
           +AAAA+      SV AQ++   +G +     SEWRT   E  +++AK  G     +E+  
Sbjct: 12  LAAAALGSMLPVSVFAQKK-LVLGFAQVGAESEWRTANTESIKSSAKDAG-----IELKF 65

Query: 66  QSGNVDVQGQIGHIRNFMNQGVDAILINPGSPTAFDPIFAQAKARNILVIATDAEVSSK- 124
                  + QI  IR+++ Q VD I  +P   + ++ +  +AKA  I V+ TD  VS+K 
Sbjct: 66  SDAQQKQENQIKAIRSYIAQKVDVIAFSPVVESGWETVLREAKAAKIPVVLTDRSVSTKD 125

Query: 125 DALYV---GIDQKAWAAQSAQWLADAL---KGKGSVVAINGIAGNPANEARVAGYREVFK 178
           D+LYV   G D      ++ +WL + +   KG  ++V + G  G+     R  G+ E+ K
Sbjct: 126 DSLYVTFMGSDFIEEGRKAGRWLVEKMKDQKGDVNIVELQGTVGSAPAIDRKKGFEEIIK 185

Query: 179 KYPDIKVLNEANASWDQAQGQQAMQNLL-ATYPDISGVWV-QDGMADGAWRAIEAAG--K 234
             P  K++      + +A+G++ M+  L A    I+ ++   D MA GA +AIE AG   
Sbjct: 186 ADPKFKIIRSQTGDFTRAKGKEVMEAFLKADGKKINVLFAHNDDMAIGAIQAIEEAGLKP 245

Query: 235 TKDI 238
            KDI
Sbjct: 246 AKDI 249