Pairwise Alignments

Query, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 318 a.a., ABC transporter periplasmic-binding protein YtfQ from Escherichia fergusonii Becca

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 1   MFRNLMAAAAMVLAAGTSVHAQEQSFKIGLSNSFVGSEWRTQMIEEAQAAAKAWGEKGVK 60
           M++ L+  +A+  +A  S  A      +G S     S WR      A++ A+  G     
Sbjct: 1   MWKRLLVVSAV--SAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRG----- 53

Query: 61  VEVVVQSGNVDVQGQIGHIRNFMNQGVDAILINPGSPTAFDPIFAQAKARNILVIATDAE 120
           + + +  G    + QI  +R+F+ QGVDAI I P   T ++P+  +AK   I V   D  
Sbjct: 54  ITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRS 113

Query: 121 VSSKD-ALY---VGIDQKAWAAQSAQWLADALKGKG-SVVAINGIAGNPANEARVAGYRE 175
           +  KD +LY   V  D       S  WL   + GK  +VV + G  G      R  G+ E
Sbjct: 114 IDVKDKSLYMTTVTADNILEGKLSGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAE 173

Query: 176 VFKKYPDIKVLNEANASWDQAQGQQAMQNLLATYPDISGVWV----QDGMADGAWRAIEA 231
             K  P+IK++   +  + +++G++ M++ +    +   + +     D M  GA +AI+ 
Sbjct: 174 AIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKE 233

Query: 232 AG--KTKDIAATGEI 244
           AG    KDI  TG I
Sbjct: 234 AGLKPGKDI-LTGSI 247