Pairwise Alignments

Query, 354 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  112 bits (279), Expect = 2e-29
 Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 6/310 (1%)

Query: 4   IRQLADYLQISIGTVSRALNGKPDVNEETRRRVLEAAEKLGYVANQSGRSLRQGTTNVIG 63
           ++ +A   ++S  TVSRAL     V++ TR RV +AA ++GY+    GR++++  +  I 
Sbjct: 12  MKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTIL 71

Query: 64  LMTGSDAQTVENSDNFFLGVTDGLQSVFSGHNLDLIVLPCPGEEDPDEYLKRMVARRMVD 123
           ++        +  D FF  +  G++   + H   +++  C  +   ++    ++  + +D
Sbjct: 72  VIVP------DICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQID 125

Query: 124 AMIISATRRTDKRVDFLKQNRLPFVALGRTASSDDHAWIDLDFEGVAKNAVDRLVAAGHR 183
            M++  +R         ++N  P V     A   +   + +D    A +AV+ L   GH+
Sbjct: 126 GMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHK 185

Query: 184 SIAVAAPDSDINLGYVFLEGYRRALEDNGIPYDSSLVVRAKSSEQGGYHAASEWLQMRPR 243
            I   A   ++ L +  L+GY +AL   GI  D   + R   + + G  A  + L +   
Sbjct: 186 RIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQP 245

Query: 244 PTAIVLIYELMAVGLYRRLAEAGLKPGQDLAVIGFRDGPRGQFLEPRLTSFRTSLHDLGV 303
           PTA+    ++MA+G   +    GLK  +DL++IGF +    QF +P LT+     +++G 
Sbjct: 246 PTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGR 305

Query: 304 TVAQTLLSTM 313
                LL  M
Sbjct: 306 EAMLLLLDQM 315