Pairwise Alignments

Query, 354 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 337 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

 Score =  143 bits (360), Expect = 7e-39
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 28/347 (8%)

Query: 4   IRQLADYLQISIGTVSRALNGKPDVNEETRRRVLEAAEKLGYVANQSGRSLRQGTTNVIG 63
           +++ A  + +S  TVSRAL G P+V EETR+RV+EAA K GY  N +   L  G    IG
Sbjct: 3   LKEFAAKVGLSPTTVSRALGGYPEVREETRQRVMEAALKYGYRPNANAVRLATGRAGAIG 62

Query: 64  LMTGSDAQTVENSDNFFLGVTDGLQSVFSGHNLDLIVLPCPGEEDPDEYL---KRMVARR 120
           ++ G          +FF     G+ +       D++V     + + DE L    R+ A  
Sbjct: 63  VVMGR-----SGGGHFFSEFMGGMATRLENEETDILV-SVTVDNNLDEELAIFSRLAASG 116

Query: 121 MVDAMIISATRRTDKRVDFLKQNRLPFVALGRTASSDDHAWIDLDFEGVAKNAVDRLVAA 180
            VD +I+ + R  D+R+  L +  +PF+  GR+ ++ +HAW+D+D   V        +  
Sbjct: 117 RVDGIIVHSPRPEDERIALLNRLGVPFIVHGRSKTAFEHAWLDIDNHDVTYRPTIHFLER 176

Query: 181 GHRSIAVAAPDSDIN--LGYVFL----EGYRRALEDNGIPYDSSLVVRAKSSEQGGYHAA 234
           GHR IA+      IN  +G  F+    +G+R AL  +GI  D   ++    SE   +  A
Sbjct: 177 GHRRIAL------INGPVGRTFVQDREQGFREALATHGITPDPRFMMSEHFSEDAAFRFA 230

Query: 235 SEWLQMRPRPTAIVLIYELMAVGLYRRLAEAGLKPGQDLAVIGFRD---GPRGQFLEPRL 291
              L+  PRPTA V    + A G+YR   + GL  G+D++VI   D       + + P L
Sbjct: 231 RSLLEQTPRPTAFVAGAMMTAQGVYRAATQLGLVIGKDVSVIAHDDVFPYLTPESMMPPL 290

Query: 292 TSFRTSLHDLGVTVAQTLLSTMPAYAPFYPDQARHRVWPMLLVPGES 338
           ++ R+S+   G+ V   LL  +       P +    +WP+ L+  ES
Sbjct: 291 STTRSSMRMAGMRVTDLLLQIVGG----RPVREVQELWPVELILRES 333