Pairwise Alignments

Query, 354 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 341 a.a., transcriptional regulator repressor from Agrobacterium fabrum C58

 Score =  146 bits (369), Expect = 7e-40
 Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 14/347 (4%)

Query: 4   IRQLADYLQISIGTVSRALNGKPDVNEETRRRVLEAAEKLGYVANQSGRSLRQGTTNVIG 63
           ++QL+  L IS  T+SRALNG P+V+ ETRRRV+EAAEK GY  N + + L  G    IG
Sbjct: 3   LKQLSQLLGISQTTISRALNGYPEVSAETRRRVMEAAEKTGYRPNAAAQRLATGKVGSIG 62

Query: 64  LMTGSDAQTVENSDNFFLGVTDGLQSVFSGHNLDLIVLPCPGEEDPDEYLKRMVARRMVD 123
           L+          SD  F     GL    S     L+++P   E + D  L+ + A   VD
Sbjct: 63  LVMPIGEH--HRSDVHFGEFLSGLGEEASRSGFHLVIMPTEPENERDA-LRGLAASGSVD 119

Query: 124 AMIISATRRTDKRVDFLKQNRLPFVALGRTAS-SDDHAWIDLDFEGVAKNAVDRLVAAGH 182
            + ++  +  D R+  ++   LPF+  GR+    +D+ ++D+D EG   +A   L+  GH
Sbjct: 120 GIYLAYMKNNDPRIAMMQSLSLPFLVHGRSVGVEEDYPYLDVDNEGAFHDATQLLLQLGH 179

Query: 183 RSIAVAAPDSDINLGYVFLEGYRRALEDNGIPYDSSLVVRAKSSEQGGYHAASEWLQMRP 242
             I +       +  Y    G  +AL  NG+         +  +++ GY      L    
Sbjct: 180 TRIGLLNGPEGYDFTYRRCLGVEKALAANGLSLHPDNKRHSSMTDEEGYLGMEALLSRPE 239

Query: 243 RPTAIVLIYELMAVGLYRRLAEAGLKPGQDLAVIGFRDG----PRGQFLEPRLTSFRTSL 298
           +PTAI+     +A+G  R L + GLKPG+D+++I   D         F  P LT+ R+SL
Sbjct: 240 KPTAILCASTALALGAIRSLNQRGLKPGRDISLIAHDDVLPLLKPDNFSVP-LTTTRSSL 298

Query: 299 HDLGVTVAQTLLSTMPAYAPFYPDQARHRVWPM-LLVPGESDPAPAA 344
              GV V Q L++ +         +    +W   L+V   + PAP A
Sbjct: 299 RAAGVRVGQRLINRI----KLNQTEPHQELWKAELVVRASTGPAPKA 341