Pairwise Alignments

Query, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 421 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  116 bits (290), Expect = 1e-30
 Identities = 108/401 (26%), Positives = 174/401 (43%), Gaps = 22/401 (5%)

Query: 23  AAHAEDVTLTLWSLDRDIQPAPNLIKEFNALNNGIKIEYRQLQFDDVVSESMRAYSTGNA 82
           AA A ++    +  D  ++    LI EF   N  I ++     + D  +  + A  +G  
Sbjct: 25  AAQAVEIEYWQYVFDTRVKAMDELIAEFQKANPDITVKQVTFPYADYQTRVIAANLSGKG 84

Query: 83  PDIIAIDNPNHAMFASRGAFLDVTDMIAKSDVIKTENYFPGPLKSVTWDGKYFGVPKATN 142
           PD++ +       FA+ G    +       D I++E +FP  + ++     Y+G+P A  
Sbjct: 85  PDVMQLFYGWLDKFAAGGILQPLPKDAFPHDKIESE-FFP-IVSAMKRGDDYYGLPTAVR 142

Query: 143 TIALYYNKDLFKAAGLDAAKPPQTWDELVDAARKLT--NPAKN--VYGISFSAKANEEGT 198
           ++AL+YNK LF  AGLDAA PP+T DE V AA K+   + A N  V G +      +   
Sbjct: 143 SLALFYNKKLFTEAGLDAANPPKTLDEFVAAAEKIAKHDAAGNLTVAGSTLDMGGQDHQW 202

Query: 199 FQFLPWAQMAGATYKN------INTDGAVKALETWKTL-LDEKLASPDTLTRSQWDSTAT 251
           ++ +   Q  G  Y +       N++  ++AL+ + +L L++K+     +   Q    A 
Sbjct: 203 WREVLIRQYGGEPYADNDQKVTYNSEPGIQALKFYTSLQLEKKIGQVGFMDEGQ----AA 258

Query: 252 FNAGNAAMAISGPWEIDRMLKDAKFDWGVTLLPVPTPDAPRSSAMGDYNWAIFSKTKHPA 311
           F AG A M I G + +        F+WGVT LP    +   + A    N      T    
Sbjct: 259 FRAGKAGMTIDGTFRLGSFRTIKDFEWGVTELPTNDKNIRSNYASYFANGISAKTTGEEL 318

Query: 312 EAFKAIEFFASKDKDM---FKNFGQLPARSDIPVPPTGNALKDEALKTFVEQLKYAQPRG 368
           EA K    + S  + M    K  G+LPAR    +  T   LKD     F++ L+YA    
Sbjct: 319 EASKKFLAYISSPEAMAIWLKTVGELPARRSAAL--TEENLKDPIYAPFLKGLEYAHTTL 376

Query: 369 PSPEWPKISKAIQDAIQGALSGQMTPKAALDQAAEKIKLVD 409
              E  +   AI    +  L GQ    +    A  + +++D
Sbjct: 377 FMDEAAQRQNAIDMTNRVLLEGQSVEDSVKQAAEAEQEIID 417