Pairwise Alignments

Query, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 416 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  102 bits (253), Expect = 3e-26
 Identities = 87/340 (25%), Positives = 160/340 (47%), Gaps = 30/340 (8%)

Query: 84  DIIAIDNPNHAMFASRGAFLDVTDMIAKSDVIKTENYFPGPLKSVTWDGKYFGVPKATNT 143
           D++ +D    A FA+ G   D +     +       Y P   ++ T +GK   +P   ++
Sbjct: 90  DVLMLDVIRPAQFATAGWTSDFSGKDLSA-------YLPTYAEANTVNGKIVALPAFADS 142

Query: 144 IALYYNKDLFKAAGLDAAKPPQTWDELVDAARKLTNPAKN--VYGISFSAKANEEGTFQF 201
           + LYY KDL    G+   KPP TWDEL +A++K+    KN  + G+SF  KA E     F
Sbjct: 143 MFLYYRKDLLDKYGI---KPPTTWDELKEASKKVMEGEKNPELQGLSFQGKAIEGAVCTF 199

Query: 202 L--PWAQMAGATYK---NINTDGAVKALETWKTLLDEKLASPDTLTRSQWDSTATFNAGN 256
           L   W++          N +   AV +L+ WK+ +D+ ++  +    +  D+   F AG 
Sbjct: 200 LLPYWSEGKSLVENGKLNFDNKAAVDSLKLWKSFVDDGISKKNISEVATDDTRKEFQAGK 259

Query: 257 AAMAISGPWEIDRML-KDAKFD--WGVTLLPVPTPDAPRSSAMGDYNWAIFSKTKHPAEA 313
              A++  +       K+++ +   GV  LP       +++ +G + + + + +K   EA
Sbjct: 260 VLFAVNWSYAWTHFQGKESQVNDKVGVARLPA-VKGGEQTTCLGGWEFGVSAYSKQQDEA 318

Query: 314 FKAIEFFASKD--KDMFKNFGQLPARSDIPVPPTGNALKDEALKTFVEQL---KYAQPRG 368
            K +E+ +S+D  K M  N   LP  + +      +A   + +  F + L   + A+ R 
Sbjct: 319 KKLVEYLSSQDVSKFMAINAALLPTYAAL----YKDADVTKTIPWFADALPVVETAKARP 374

Query: 369 PSPEWPKISKAIQDAIQGALSGQMTPKAALDQAAEKIKLV 408
            +P + ++S+ I+  + G L+G MTP+    Q   +++ V
Sbjct: 375 VTPRYNEVSETIRTTVNGVLAGVMTPEDGAKQMESRLRRV 414