Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 810 a.a., ATPase AAA from Pseudomonas simiae WCS417

 Score =  570 bits (1470), Expect = e-167
 Identities = 361/869 (41%), Positives = 481/869 (55%), Gaps = 75/869 (8%)

Query: 1   MSHIDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVDA--GIYAETFDEL 58
           M ++DL +L+  L    R  L  AA   +  G R V +   LLA+++   G+      + 
Sbjct: 1   MMNVDLQQLIQTLTAQARRDLVRAAERCLTRGGREVLVEDLLLALLEHQDGLLVRAMADA 60

Query: 59  KIPLPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWI-----LASLEAGRDRVTLC 113
            I    L+A +           GEA +    +   A   W+     +A +E  +  V   
Sbjct: 61  GIEAGELQATLQPK--------GEASASRNPVFALALVQWLQQALMVAHVELRQAEVDHG 112

Query: 114 DLLLAMDEETSLRSFVRSAFPSLKAMDRGALERLRSSAENGAGVDVPSALTSSGEAGSAQ 173
            LLLA+        +  SA+  L  + R  ++R+       A    P+    S       
Sbjct: 113 ALLLALLRHPL--QYAGSAYQVL--LSRLDVQRVHGFVLGQAPCPGPAPTVDS------- 161

Query: 174 AAGQNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKT 233
                  L  +THD+T  AR G++DPV+ RD E+ QL+DIL RRR+NNPILVGEAGVGKT
Sbjct: 162 ------LLERFTHDLTRQAREGRIDPVLCRDAEIGQLIDILMRRRKNNPILVGEAGVGKT 215

Query: 234 AVAEALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPV 293
           AV E LAL + +  VPE LR+V +L LD+ LLQAGA +KGEFERRL GVID V  S +PV
Sbjct: 216 AVVEGLALRVVTAQVPEPLRDVRVLTLDMGLLQAGASIKGEFERRLKGVIDEVNASMKPV 275

Query: 294 ILFIDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRF 353
           ILFIDEAH LVGAG  AG  DAAN+LKPALARGE+RT+AATTWSEYKKYFEKD AL RRF
Sbjct: 276 ILFIDEAHTLVGAGAQAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRF 335

Query: 354 QPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSL 413
           QPV V EP    A+ +LRG+   +   H V VRD+A+VAA Q+SARY+  RQLPDKAV +
Sbjct: 336 QPVLVGEPSVEQAVSILRGLVSVYERSHGVYVRDDAVVAAAQMSARYLSGRQLPDKAVDV 395

Query: 414 LDTAAAAVSLARQTLPERLRAMESERHLLSDELNWLLREPQDEDMQNRIQSIRDELERLE 473
           LDTA A +   R T PE L+   +E               Q E ++      RD  E   
Sbjct: 396 LDTACARLRTRRDTAPEALQRFYAE---------------QAEGVRQHQAISRDRQEGFP 440

Query: 474 AGIDDLRGRYDAEMAELAALSEEQPAETGASNVSHLRPATEMRPANAERLVPTVVDREAI 533
                L G                  ET  S   HL      +P + +++ P +V     
Sbjct: 441 VDEQVLHGL-------------NLRMETMESERQHLEQCWLEQPTSTQQVCPRLV----- 482

Query: 534 AAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIADAMRTARAGLSDPRR 593
           A V+S WTGIP+ +L  +       L   +R R++GQ+ A+  +   +R   AGL+    
Sbjct: 483 AEVISGWTGIPVEQLAFEHSARVLGLADALRARILGQEHAVQALDRNLRAVAAGLNKVDA 542

Query: 594 PPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKVSLLLGSPPGYVGF 653
           P  VF LVG SG GKTETAL+L DLLYGG   +TT+NMSEF+E+H +S L+G+PPGYVGF
Sbjct: 543 PVGVFLLVGPSGVGKTETALALGDLLYGGERFVTTLNMSEFQEKHSLSRLIGAPPGYVGF 602

Query: 654 GEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEGRDVDFKNTTIFM 713
           GEGGVLTEAVR+RP+ V+LLDE++KA P V ++FYQ+FDKGV  DGEGR++DF+NT I M
Sbjct: 603 GEGGVLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQIFDKGVANDGEGREIDFRNTLILM 662

Query: 714 TANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGRTIILPFMPLGAEELAS 773
           T+N GSE +  L A     PE   L+  + P L   FKPA L R  ++P+ P+  E L  
Sbjct: 663 TSNLGSECIGELCAG-GQRPEMHVLQEAIRPLLRDHFKPALLARIRVVPYYPVTGEILND 721

Query: 774 VVDMQIGKIRDRVLATYGTDLRLSDAARDALVA----RAGASEIGARAIEIMIGKDLLPP 829
           +  +++ ++  R+        +L+ +    LVA         + GAR I+  I   LLP 
Sbjct: 722 LTRLKLERLGQRLSLR-----KLAFSYTPGLVAHMAEHCSHGDSGARFIDQWIELHLLPQ 776

Query: 830 LSSFFLEKVIAGERVGKIVVDFGENGFGI 858
           +    L  +   E +  +      NG  I
Sbjct: 777 VVDRLLRAMAQDEPLTHVHAYLAGNGMPI 805