Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 908 a.a., type VI secretion system ATPase TssH from Paraburkholderia sabiae LMG 24235

 Score =  654 bits (1687), Expect = 0.0
 Identities = 384/872 (44%), Positives = 526/872 (60%), Gaps = 33/872 (3%)

Query: 4   IDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVV---DAGIYAETFDELKI 60
           I    L G L   L  ++E+A +     G+ YV++ HWL  ++   D+ ++        I
Sbjct: 3   ISRQALFGKLGATLFRSIESATTFCKLRGNPYVELVHWLHQLIQLPDSDLH-RIVRHAGI 61

Query: 61  PLPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMD 120
               L+ ++ R+L     G       S +I  A   AW+LA+LE G  RV    L+ A+ 
Sbjct: 62  EQDTLERDLARALAALPAGASSISDFSHHIELAIERAWVLATLEFGDRRVRGAWLIAALA 121

Query: 121 EETSLRSFVRSAFPSLKAMDRGALERLRSSAENGAGVDVPSALTSS-------GEAGSA- 172
               LR  + S  P+   +    +    ++   G+         +S       GEA  A 
Sbjct: 122 GTPELRRILLSISPAFGRIPATGMGEALTAWIEGSPESADMPYDNSDFSPAVPGEASQAV 181

Query: 173 QAAGQNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGK 232
           Q AG+   L  Y  DMT  AR G++D V GR  E+R + DIL RRRQNNP+L GEAGVGK
Sbjct: 182 QVAGKGSLLDQYCTDMTARARAGEIDTVTGRGAEIRVMSDILQRRRQNNPLLTGEAGVGK 241

Query: 233 TAVAEALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEP 292
           TAV E LAL IA+G+VP  L  V L++LD+  L AGA +KGEFE RL GV++A  +S+ P
Sbjct: 242 TAVVEGLALAIAAGDVPPTLAGVRLMSLDVGALLAGASMKGEFESRLKGVLEAAVKSSVP 301

Query: 293 VILFIDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRR 352
           +ILF+DE H LVGAGG AG GDAAN+LKPALARG VR + ATTWSEYK++ EKD ALTRR
Sbjct: 302 IILFVDEIHTLVGAGGQAGTGDAANLLKPALARGAVRMIGATTWSEYKRHIEKDPALTRR 361

Query: 353 FQPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVS 412
           FQ + V EP+E  AI M+RG+A  F  HH V + DEAI AAV LS RY+P+RQLPDKA+S
Sbjct: 362 FQVLQVPEPEEVAAIDMVRGLAAAFSKHHGVVILDEAIRAAVTLSHRYIPSRQLPDKAIS 421

Query: 413 LLDTAAAAVSLARQTLP-------ERLRAMESERHLLSDELNWLLREPQDEDMQNRIQSI 465
           LLDTA A V+L++ T P       +RL+A   ER LL  E    L      D    + ++
Sbjct: 422 LLDTACARVALSQHTPPRELQNVRQRLQAAHVERELLEQEARIGL------DADKAMAAV 475

Query: 466 RDELERLEAGIDDLRGRYDAEMAELAALSEEQPA----ETGASNVSHLRPATEMRPANAE 521
           +  +  L A    +  R+  ++A   AL+  + A    +  A ++  LR    M   + +
Sbjct: 476 QARISTLSAQEGAIDARWQTQLAAARALARARAAVAAGDDDAPSLDTLRNLERML-CDLQ 534

Query: 522 RLVPTV---VDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIA 578
              P V   VD   IA +VS WTGIP+G+++ D+I + RTL   +  RV+GQ  A+ +I+
Sbjct: 535 GDTPLVFPDVDAAIIAEIVSDWTGIPVGRMVTDEITAVRTLPETLGARVIGQSDALHQIS 594

Query: 579 DAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEH 638
           + ++TARAGL+DP++P  VF L G SG GKTETAL+LA+ LYGG  +L TINMSE++E H
Sbjct: 595 ERVQTARAGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQNLITINMSEYQEAH 654

Query: 639 KVSLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRD 698
            VS L G+PPGYVG+GEGGVLTEAVRRRP+ V+LLDEI+KAH  V ++F+QVFDKG + D
Sbjct: 655 TVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHHDVHEMFFQVFDKGYMED 714

Query: 699 GEGRDVDFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGRT 758
           G+GR +DF+NTTI +T+N  SEL ++L AD    P+ + L   L PEL K F  AF+GR 
Sbjct: 715 GDGRYIDFRNTTILLTSNAASELTASLCADATLAPDQDGLREALAPELLKTFPAAFMGRV 774

Query: 759 IILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGARAI 818
            ++P+ PL    LAS+V + + ++  R+   +   LR S+   D +VAR    E GAR +
Sbjct: 775 TVVPYRPLAHASLASIVRLHLNRVVRRMADGHDIALRYSERVVDYIVARCLVQETGARVL 834

Query: 819 EIMIGKDLLPPLSSFFLEKVIAGERVGKIVVD 850
              I + +LP LS+ +L+   +   +  I VD
Sbjct: 835 IGFIEQHILPRLSALWLDAFSSKRALTGIGVD 866