Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 884 a.a., type VI secretion system ATPase TssH from Paraburkholderia sabiae LMG 24235

 Score =  677 bits (1746), Expect = 0.0
 Identities = 393/887 (44%), Positives = 536/887 (60%), Gaps = 40/887 (4%)

Query: 6   LNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVD--AGIYAETFDELKIPLP 63
           L  L+  L P  R   E AAS  +  GH  VD+ H   A++D  A           I + 
Sbjct: 5   LKTLIAKLNPTCRQATEQAASRCLSRGHYEVDLEHLFGALLDEAATDVPLVLRASAIDIN 64

Query: 64  VLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDEET 123
            L+ ++ R LE    G+      S +++    +AW++ASL++   R+    LLLA+    
Sbjct: 65  ALRGDLERELERLKTGNTRTPVFSVHLIALFEQAWLIASLDSQIARIRSGHLLLALLSAP 124

Query: 124 SLRSFVRSAFPSLKAMDRGALE-RLRSSAENGAGVDVPSALTSSGEAGS----AQAAGQN 178
            L  F +   P    +    L+ R     +     +V +A T S E        +A  + 
Sbjct: 125 DLAQFAQRMSPLFAQVRVTDLKHRFDELTQGSRESEVATASTESAEFADENARVKAPSKT 184

Query: 179 DFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAEA 238
             L  YT ++T  AR+G +DPVIGR+ E+RQ +DIL RRRQNNPI+ GEAGVGKTAV E 
Sbjct: 185 PALDTYTTNLTQRARDGHIDPVIGREAEIRQTIDILMRRRQNNPIMTGEAGVGKTAVVEG 244

Query: 239 LALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILFID 298
           LAL IA+ +VP  LR V L  LD+ LLQAGA VKGEFE RL  VID VK+SA P+ILFID
Sbjct: 245 LALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFID 304

Query: 299 EAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVHV 358
           EAH ++GAGG AGQ DAAN+LKPALARGE+RT+AATTWSEYKKYFEKDAAL RRFQ V +
Sbjct: 305 EAHTIIGAGGTAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKI 364

Query: 359 REPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSLLDTAA 418
            EP EA A  MLRG+A     H NV + D+AI  AV+LS RY+  RQLPDKA+S+LDTA 
Sbjct: 365 EEPSEALASAMLRGMAAMMEKHFNVRILDQAITEAVRLSHRYISGRQLPDKAISVLDTAC 424

Query: 419 AAVSLARQTLPERLRAMESERHLLSDELNWLLRE-----PQDEDMQNRIQSIRDELERLE 473
           A V+LA+   P  +         +  E+  L RE       DE +         E+ERL 
Sbjct: 425 AKVALAQSATPAAIDDTSKRIERIDAEVAALEREAASGATHDERLAELRGQRASEVERL- 483

Query: 474 AGIDDLRGRYDAEMA---ELAALSEEQPA----ETGASNVSHLRPATEMRPANAERL--- 523
            G D  + RY+ E A   E+ AL E+  A    ++ A +  ++R   E R A    L   
Sbjct: 484 -GHD--QARYEKERAIVGEIVALREQLDASRDGKSNADDAPNVRETLESRVAELAELQKT 540

Query: 524 ---VPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIADA 580
              VP  VD   +A +V+ WTGIPLG+++ D++ +   L   +  RV+GQD A+  IA  
Sbjct: 541 TPMVPLQVDAHVVAEIVASWTGIPLGRMVKDELRTVLNLQPLLTARVIGQDHALEAIAQR 600

Query: 581 MRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKV 640
           +RTA A L DP +P  VF  VG SG GKTETAL+LAD+LYGG   + TINMSE++E H V
Sbjct: 601 VRTASANLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMITINMSEYQEAHSV 660

Query: 641 SLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGE 700
           S L GSPPGYVG+GEGGVLTEAVRR P+ V+LLDE++KAHP V ++F+QVFDKG + D E
Sbjct: 661 SGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMDDAE 720

Query: 701 GRDVDFKNTTIFMTANTGSELL--SALSADPDTMPEGEALEALLMPELTKQFKPAFLGRT 758
           GR++DF+NT I +T+N GS ++  + L+   + +P+ EAL  +L  +L K FKPAFLGR 
Sbjct: 721 GREIDFRNTLIILTSNVGSSVVMQACLNKSAEELPDAEALSEMLRSQLYKAFKPAFLGRM 780

Query: 759 IILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGARAI 818
            ++P+ P+  + LA ++++++ +I+ R+ A +  +    ++  DA++AR    + GAR +
Sbjct: 781 KVVPYYPISDDVLAEIIELKLERIQRRIEANHKAEFEWDESLVDAVLARCTEVDSGARNV 840

Query: 819 EIMIGKDLLPPLSSFFLEKVIAGERVGKIVVDFGENGFGIRAEAAGE 865
           + ++   LLP ++   LE++  G  + +I         G RA  AGE
Sbjct: 841 DHILNGTLLPEIAQQVLERIADGVPIKRI---------GARATEAGE 878