Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 865 a.a., type VI secretion system ATPase TssH from Pectobacterium carotovorum WPP14

 Score =  585 bits (1509), Expect = e-171
 Identities = 353/872 (40%), Positives = 509/872 (58%), Gaps = 47/872 (5%)

Query: 1   MSHIDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVD------------A 48
           M  I+L  LV  L P  R  LE AA++ ++     + I H LL +++            A
Sbjct: 1   MIRIELPTLVERLNPVCRHMLEEAAALCIQHQGAEIRIEHLLLKMLETPLCDVRQILKRA 60

Query: 49  GIYAETFDELKIPLPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRD 108
           G+ A+    L +P          S+++    D    S S  ++   +++W+LAS E    
Sbjct: 61  GVDADELSSLLLP---------SSMDKEF--DAGYPSFSPLLVEWLQDSWLLASAEFQHV 109

Query: 109 RVTLCDLLLAMDEETSLRSFVRSAFPSLKAMDRGALERLRSSAENGAGVDVPSALTSSGE 168
           R+    LLL +    +   +V  A     A     L R +        V+   A+ S   
Sbjct: 110 RLRSGILLLVL--LLTPNRYVAGAVSRPLAQINRELLRQQFDEWVKDSVETEVAVQS--- 164

Query: 169 AGSAQAAGQNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEA 228
           A + QAA  N  L  YT ++T  AR G++DPV+ RD E+  ++DIL+RRR+NNPI+VGEA
Sbjct: 165 ATAEQAAAANTQLSRYTQNVTESARQGQLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEA 224

Query: 229 GVGKTAVAEALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKR 288
           GVGK+A+ E LAL I +G VPE+LR+V LL LD+  +QAGA VKGEFE+R  GV+  VK 
Sbjct: 225 GVGKSALIEGLALRIVAGAVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKD 284

Query: 289 SAEPVILFIDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAA 348
           S  P+ILFIDEAH L+GAG  AG  D +N+LKPALARGE+RT+AATTWSEYKKY EKDAA
Sbjct: 285 SPRPIILFIDEAHTLIGAGNQAGGLDVSNLLKPALARGELRTIAATTWSEYKKYVEKDAA 344

Query: 349 LTRRFQPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPD 408
           L+RRFQ V V EP+   A  +LRG+   +   H V + ++A+ AA QLSARY+  RQLPD
Sbjct: 345 LSRRFQLVKVGEPNAEEATVILRGLRGIYEKAHGVLIDEDALQAAAQLSARYISGRQLPD 404

Query: 409 KAVSLLDTAAAAVSLARQTLPERLRAMESERHLLSDELNWLLREPQD--EDMQNRIQSIR 466
           KA+ +LDTA+A V++   T P  +  +++  H    E+  L R+ +    + + R+  +R
Sbjct: 405 KAIDVLDTASARVAINLTTPPRAVSQLQTRLHQQEMEITQLERQARIGLGNTEERLAELR 464

Query: 467 DELERLEAGIDDLRGRYDAEMAEL--------AALSEEQPAETGA-SNVSHLRPATEMRP 517
           D  E     +  L   +  +  ++        A L EEQ  +  A S  + L    +   
Sbjct: 465 DAREAGAVQLAQLEADWQQQKTQVQRVIELRTALLDEEQSVDFDAVSAAAELATCEQALE 524

Query: 518 A--NAERLVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAIT 575
           A   +  LV   VD+  IAAV++ WTG+PL ++   +++    L   +   + GQ  AI 
Sbjct: 525 ALQQSSVLVSPHVDKTQIAAVIAEWTGVPLNRISQSEMDVVTRLPEFLGDLIKGQQLAIA 584

Query: 576 RIADAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFK 635
            +   + TARA L  P RP   F LVG SG GKTET L +ADL++GG ++LTTINMSE++
Sbjct: 585 HLHKHLLTARADLRRPGRPLGAFLLVGPSGVGKTETVLQIADLMFGGRNYLTTINMSEYQ 644

Query: 636 EEHKVSLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGV 695
           E+H VS L+GSPPGYVGFGEGGVLTEA+R++P+ V+LLDE++KAHP V ++FYQ FDKG 
Sbjct: 645 EKHTVSRLIGSPPGYVGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGE 704

Query: 696 LRDGEGRDVDFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFL 755
           L DGEGR +D +N   F+T+N G + +   +   D + +       L PEL   FKPA L
Sbjct: 705 LADGEGRVIDCRNVVFFLTSNLGFQTIVNYAEQSDVLLDA------LYPELAAFFKPALL 758

Query: 756 GRTIILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGA 815
            R  ++P++PL  + +  +V  ++ ++   +   +G ++ + D   + ++  A  SE GA
Sbjct: 759 ARMEVIPYLPLAHDTMVEIVQGKLSRLVSLLQQRFGAEVIIEDEVPEEILRLANRSENGA 818

Query: 816 RAIEIMIGKDLLPPLSSFFLEKVIAGERVGKI 847
           R +E +I   LLPP+S   L+++ AGE V +I
Sbjct: 819 RMLESVIDGALLPPVSLQLLQRMSAGEPVSRI 850