Pairwise Alignments

Query, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 879 a.a., ClpB protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  664 bits (1713), Expect = 0.0
 Identities = 389/874 (44%), Positives = 526/874 (60%), Gaps = 31/874 (3%)

Query: 4   IDLNRLVGALEPDLRVTLEAAASVAVRMGHRYVDIPHWL--LAVVDAGIYAETFDELKIP 61
           +  + L G L   L  +LE+A +      + +V++ HWL  L               +IP
Sbjct: 5   VSRSALYGKLAGPLFRSLESATAFCKLRSNPWVELTHWLHQLTQQPDNDILHVLRHYQIP 64

Query: 62  LPVLKAEIGRSLEEAIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDE 121
           L  ++  + R L+    G       S +I  +  +AW+LAS+  G +++    LLLA+  
Sbjct: 65  LSDVEKALLRQLDMLPAGASAISDFSHHIDLSVEKAWMLASVRYGDNKIRSGWLLLALLT 124

Query: 122 ETSLRSFVRSAFPSLKAMDRGALERL-----RSSAENGAGVDVPSALTSS--GEAGSAQA 174
              LR  + S    L  +    L  +      +S E        S L S+  GE+  A  
Sbjct: 125 TPELRRVLSSICAPLATLPVDELTEILPSLIETSPEAQERPYDGSGLASAIPGESSQAIP 184

Query: 175 AGQND---FLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVG 231
            G  D    L  Y  DMT  AR+GK+DPV GR+ E+R + DIL RRRQNNP+L GEAGVG
Sbjct: 185 NGGQDGKSALAKYCQDMTAQARDGKIDPVTGREHEIRTMTDILLRRRQNNPLLTGEAGVG 244

Query: 232 KTAVAEALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAE 291
           KTAV E  AL IA G VP  LR V LL LD+  L AGA +KGEFE RL G+++   RS +
Sbjct: 245 KTAVVEGFALAIAQGEVPPALREVRLLALDVGALLAGASMKGEFESRLKGLLEEAGRSPQ 304

Query: 292 PVILFIDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTR 351
           PVILF+DE H LVGAGGA+G GDAAN+LKPALARG +RT+ ATTWSEYK++ EKD ALTR
Sbjct: 305 PVILFVDEVHTLVGAGGASGTGDAANLLKPALARGTLRTIGATTWSEYKRHIEKDPALTR 364

Query: 352 RFQPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAV 411
           RFQ + + EP+E  A+ M+RG+ DT   HHNV + DEA+ AAVQLS RY+PARQLPDKA+
Sbjct: 365 RFQVLQIAEPEEIPAMEMVRGLVDTLEKHHNVLILDEAVRAAVQLSHRYIPARQLPDKAI 424

Query: 412 SLLDTAAAAVSLARQTLP-------ERLRAMESERHLLSDELNWLLREPQDED-MQNRIQ 463
           SLLDTAAA V+L   T P       ++L+A E ER LL  +    ++  +  D +  RI 
Sbjct: 425 SLLDTAAARVALTLHTPPASVQFLRQQLKAAEMERSLLQKQEKMGIQSDERRDALMARIF 484

Query: 464 SIRDELERLEAGIDDLRGRYDAEMAELAALSEEQPAETGASNVSHLRPA-TEMRPANAER 522
           S+ +EL   E+       R+  E+  +  L E + AE+ A + + L+ A T +R    + 
Sbjct: 485 SLNNELTASES-------RWQRELELVHTLQELRLAESDADDKTTLQQAETALREWQGDA 537

Query: 523 -LVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIADAM 581
            +V   V    +AA+V+ WTGIP G+++ D+      L  R+ QRV GQD A+ +I + +
Sbjct: 538 PVVFPEVSAAVVAAIVADWTGIPAGRMVKDEASQVLELPARLAQRVTGQDGALAQIGERI 597

Query: 582 RTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKVS 641
           +TARAGL DPR+P  VF L G SG GKTETAL+LA+ +YGG  +L TINMSEF+E H VS
Sbjct: 598 QTARAGLGDPRKPVGVFMLAGPSGVGKTETALALAEAIYGGEQNLVTINMSEFQEAHTVS 657

Query: 642 LLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEG 701
            L G+PPGYVG+GEGGVLTEAVRR P+ V+LLDEI+KAH  V ++FYQVFDKG + DGEG
Sbjct: 658 TLKGAPPGYVGYGEGGVLTEAVRRHPWSVVLLDEIEKAHHDVHELFYQVFDKGGMEDGEG 717

Query: 702 RDVDFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGRTIIL 761
             VDFKNTT+ +T N GS+L+S +  DP  MP+   L+  LMPEL K F  AFLGR  ++
Sbjct: 718 THVDFKNTTLLLTTNVGSDLISQMCEDPALMPDATGLKEALMPELRKHFPAAFLGRVTVI 777

Query: 762 PFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGARAIEIM 821
           P++PL       +  + + ++  R+   +G  L  S+     +VA     E GAR +   
Sbjct: 778 PYLPLDETSRGVIARLHLDRLVARMSEQHGVTLTYSEELVAHIVACCPMHETGARLLIGY 837

Query: 822 IGKDLLPPLSSFFLEKVIAGERVGKIVVDFGENG 855
           I + +LP LS ++L+ +   E+     +D G NG
Sbjct: 838 IEQHILPRLSRYWLQAMT--EKAAIRQIDIGVNG 869