Pairwise Alignments

Query, 593 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 606 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  368 bits (945), Expect = e-106
 Identities = 224/617 (36%), Positives = 322/617 (52%), Gaps = 35/617 (5%)

Query: 1   MADGFLEKYNDELFALRKRASRFAAAFPKIAGRLRMTGDVADDPHVERLIQSFAYSAARV 60
           M D  L  Y  EL  LR     FAA +PKIA RL + GD  +DPH ERLI++F++ +ARV
Sbjct: 1   MLDELLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARV 60

Query: 61  RQKLDDEFPELSDSLLETLYPHYLAPIPSMSVVQFA--PSPALATVQTLARHSEILAEPV 118
            +KLDDEFPE+ +S LE LYPHYL P PSMS+V+ +      +     +ARH+E+ A PV
Sbjct: 61  HKKLDDEFPEIVESFLEVLYPHYLRPTPSMSIVELSLGRHEKVTEAYRVARHTEMHANPV 120

Query: 119 GGESCRFRTTQEVQIAPLQIAAATLAGQPIDAPFSASFAGTASCLRLSLRSTAPRGGTFP 178
            G  C+FRT   V++ P+ +  A+       A F+   A   + LR+ L +T      F 
Sbjct: 121 EGVVCKFRTCYPVELWPIAVQQASFTEMERSA-FNGHSADLVARLRIRLAATG--DALFG 177

Query: 179 EMGLTKLQVFLSAAWQQATALYELLTNHCVGMALARHSEDK-EAIFLPAGNLRPSGFTRD 237
           +M + +L+ FL         LYELL N+     L+   + +   + LPA  L+  G+ RD
Sbjct: 178 QMDMNRLRFFLDGEATLMLQLYELLFNNLAKATLSFDDQGRSREVALPADALKTVGYARD 237

Query: 238 QAMLPYPANSFDGYRLLTEFFALPQKFLFLDIDGLHRWSGG----DCELYIYLDAAD--- 290
           + ++ Y   SF GYRLL E+F  P KF+F D+ G  R   G      E+  Y    D   
Sbjct: 238 EGLVDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILQGKAIEQVEVNFYFSDYDLSE 297

Query: 291 --AQLERMVSVKDFVLNASPVINLFKQSCEPLSLDGTRTEYRLLPDARRQRTREIYAVED 348
             A+L + +   +F LN +P+INLF+Q  EP+ L  T+ EY++ PD R     E+ +++ 
Sbjct: 298 RLARLTQNIGRNNFKLNCTPIINLFRQQAEPIKLTHTQHEYQVTPDTRLHNAAEVVSIDR 357

Query: 349 VQLTSRSG---QSEKTSPFFGRTQRNNGANVFWQIQRRFDDDGSS------DTDIAFVDE 399
           V+   + G   Q     PFF      +  + FW  +RR   D ++      D D+  +D 
Sbjct: 358 VRRVRKLGGIDQVATCQPFFEPRGEQDPHSSFWVARRRNQGDATAMSIRVVDRDLELIDA 417

Query: 400 KRGPLGPLDVVASIDTLCINRELPSQLPFGGGHPFLQLSTGNEAVKSVHALMPPTAAIRV 459
               L       SI   C NR++P  LPFGG      +   N  +K +  L  PTA +RV
Sbjct: 418 SSDTL-------SIGLTCSNRDVPLMLPFGGERGDFTI-PANSVIKDIRCLRKPTATVRV 469

Query: 460 NERSAREWRLISHLLLNHLSLTDSGGAPLKDILSLYSFRDSPETRQLVEAISKVEAQNSH 519
                  WRLI+HL LNHLSL   G   L ++LSLY++R+    R+ +  I  + ++   
Sbjct: 470 PLGKGLIWRLIAHLSLNHLSLVSQGREVLLELLSLYNYRNVSAIRKQINGIKAISSEPVV 529

Query: 520 ARIG---ATMVPGTDITVEFDPALIARPAAFVFAGVLNHFFGLYTSINSFTRLTATMRGH 576
           ARIG      V G  IT+  D +       F+F  VL+HFFG Y S+NSFT+LT   +  
Sbjct: 530 ARIGHPRPNFVRGVGITLTLDESQFIGSGVFLFGRVLDHFFGQYCSMNSFTQLTLRTQQR 589

Query: 577 SKPIARWPARAADRPLL 593
            K + +WPAR  D+PL+
Sbjct: 590 EKRVVQWPARTGDQPLV 606