Pairwise Alignments

Query, 501 a.a., OmpA-like porin from Agrobacterium fabrum C58

Subject, 282 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 8/256 (3%)

Query: 29  ARNMAAILEDIVETDEQARPARGKVAT----LPVDKLLTGFHFGGEEVPTLVQSAAPLLN 84
           A     +LED  ET      A  + AT     P D     F   G     ++ +A+ L  
Sbjct: 14  AHQKPILLEDTNETPRPPGGAGPEYATDLTSYPADP---DFQLRGGYDNLMLDAASQLFG 70

Query: 85  LAHLLRFSDAEPDPDQLRRACVEAITRYERDLASARISPERARAAHYVVCATVDDVVLSK 144
           L   LR  D  P+   + +     I     ++              Y +C  +D+ V+++
Sbjct: 71  LVIRLRTLDDLPNIQFVHKTVQTQIGTIREEMRQHGYCAVHQEVYSYALCLHLDEAVMTR 130

Query: 145 PWGVRAGWARSGLVSTFHNDVTGGDRVFDILDHFHQSPGANKDLLLLIYLCLSLAFEGRT 204
           PWG  + W+   L+S FH++  GG+++F +L+   QSP   +D+L  +Y C  L  +G+ 
Sbjct: 131 PWGQNSCWSHEPLLSIFHDETQGGEKIFVLLERIMQSPKEFQDVLEFLYFCFCLGLQGKY 190

Query: 205 RVSSKGALELSRIRDSLYKTLIGQYG-TFERELSPHWKGVDARHTPLRTMTALWTLLSLM 263
            +  KG   L  +   ++K +    G T E    P+   V   H   R     WT L + 
Sbjct: 191 ALDPKGDEILRALISRMHKVIRQLRGPTPETVSDPYSNVVHCPHRMRRWQWPWWTPLVIS 250

Query: 264 ALAFALGYLFFTLSLN 279
            +A    Y +++  L+
Sbjct: 251 VIAMVCAYSYYSYRLD 266