Pairwise Alignments

Query, 1159 a.a., IcmF family protein from Agrobacterium fabrum C58

Subject, 1208 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  237 bits (605), Expect = 4e-66
 Identities = 263/1190 (22%), Positives = 470/1190 (39%), Gaps = 93/1190 (7%)

Query: 29   LWVIALCVVVWFYGYLIALGDFKPLGTVQARLIAIGIIVAVWLV-YIIVTIYRGRKQDKE 87
            L  + + V +W+ G      D +PL +V  R +A  + V V L+ +++V   R R+   E
Sbjct: 29   LGAVLMLVAIWWLGPQWTWRDQQPLASVAHRSMASLVFVLVALLSWLVVLRTRFRRLQAE 88

Query: 88   LVDSIEREALANRQAEIGEIQTRLKEALA-LLRRVTKKRFGYIYDLPWYVIFGAPGSGKT 146
               ++  E +   Q  +   +  L + LA  L     +R   +Y LPWY++ GA  +GK+
Sbjct: 89   RQQAMAAE-VDPTQPFVHAQEKALSQGLARYLDNAGGRRA--LYRLPWYLVLGARQAGKS 145

Query: 147  TALTNSGLQFPLG--DALGENAVKGIGGTRNCNWWFADEAILIDTAGRYTTQD------- 197
            + +  +   F L   D                 WW +++A++ID  G + +Q+       
Sbjct: 146  SFIDCTDQSFSLTRIDKAQARGRPAQALAYPVGWWISNDAVIIDPPGAFISQNGPADSLG 205

Query: 198  ----DLDGSSKAG-----WEGFLGLLRRYRRSQPINGALVTLSIPDLLNRDPEEQRQELR 248
                D++ S  +G     W+  L  L+R R  + +NG ++ + +P LL+   E++     
Sbjct: 206  SDSTDVESSVPSGTQAKLWQHLLDWLQRNRSQRALNGLVLVVDLPALLHGTVEQRTALAH 265

Query: 249  SIRQRLSELDEYLHARVPVYIVLTKADLLHGFVEFFDGFNKTDRQQVWGTTFKLDESYSA 308
             +R RL E+   L +R+P+Y+VL+K DLL GF +F+   +   R  ++G TFKLD   + 
Sbjct: 266  LLRTRLYEVSSQLGSRLPLYVVLSKFDLLDGFDQFYSKLSAAKRNSLFGFTFKLDAVDTF 325

Query: 309  ENLPQRLTEEFELLQQRVDAMLIERLQQEQNAEIRGRIFRFPAELARLKDRLHEALAELC 368
            +       E ++ L +++   +I+RL  + +  +R R++    +L  L+  L   L E  
Sbjct: 326  DAWLGEYGEHYDRLLEQLFEQVIDRLDVQGSPALRSRLYSLHRQLLGLRPMLLSFLRETL 385

Query: 369  ASSPLIEAPLLRGVYFASGTQ--------------------PETEKSPAASRTRRSYFLS 408
            AS       L+RGVY++S  Q                    P  E  P A     +YF+ 
Sbjct: 386  ASDRFTTPALVRGVYWSSVVQHGDVRNAFVREAAQPYKTSLPLLEGKPQAKAL--AYFIQ 443

Query: 409  RLFKDVIFPEAALVTRDKRLSRRQLLVRRIAYAVSATAVAIVFTGWIFTYFANTQALAEA 468
            + F  VI+ EA L   + R++RR+  +  +  +V   A  +    W   +  N    A  
Sbjct: 444  QAFGRVIYKEAGLAGDNVRVARRKRQLLWVGSSVGVLAFCVAIASWHRYFDINGVKAASV 503

Query: 469  DRKLGAYEQLVQGIPVREVADADFLRILPALDNLRDVNSGFARER-VWN--VSFGLDQED 525
              K   Y        V +  D     +L  LD +RD  + F   R  W      GL Q  
Sbjct: 504  LAKSREYSH----HEVDQRLDPTGRNLLEPLDQIRDAVAVFGDYRAAWPGVADLGLYQGR 559

Query: 526  KIAGRQRDAYQRALNALLLPRM---IVQLQKQLKDEKDVTRTFNSLKLYGMLGGMGGLDR 582
             I     +AY   L+   LP +   +++         +  +   +L++Y ML        
Sbjct: 560  TIGPTVDEAYLSLLSRRFLPALASGVIEAMDAAPPGSE--QQMAALRVYRMLEDRRNRRA 617

Query: 583  DFLTTQTHQMFASLYPGDGRAAAREALDQHAKALADGVLAPIELDARLIATARETIRDQA 642
            +++     + +   +PG G+   +  L +H K         +    + ++  ++T+R   
Sbjct: 618  EWVEDWMARQWQQAFPGQGQ--LQRDLMRHLKYALTYADTDLPQYRQRVSHVQQTLRKVP 675

Query: 643  IGTRAYDILAGLPQVRELMEWTPAT---AFGPLGERAFERRSKAPMAEG---IEGLFTAD 696
            +  R Y   AGL Q  +    T        GP  +  ++  S +   +    +  + TA 
Sbjct: 676  LPQRVY---AGLKQQAQEQLHTGLDLRHQVGPAFDVVYQLSSGSSQGDNGVLLAPMLTAK 732

Query: 697  GYRRVVIPQVAHAARVALSEGWVRGSDDAIKGATVEQVA--QAALQIYFDRFEKIWADTL 754
            G++    P+      +A+ + W  G    +  +  +Q A  +    +Y   +   W   L
Sbjct: 733  GFKEYFEPRSQRFTEMAMIDQWALGERAQLDYSDADQAALNERLRNLYSADYIDSWRRAL 792

Query: 755  SDLRVKPSQSLGDAVETTRALANERNIVVEAARSIAEATDLRPGANPAALASAAEGDATA 814
            +   V   + L   V     LA     +     ++ +        N + L+    G A  
Sbjct: 793  NAFSVADFRDLDHGVTILEQLAGPAAPLHRLLETVRD--------NSSLLSPVNVGVADE 844

Query: 815  AVLAATVNAADPYARLRDMLATKGAATTGEQPNGDKTGGSPSEQLLAHFKLLN-EQLARS 873
            A    ++N+       +        A  G        G  PS     H  ++     A++
Sbjct: 845  APSPVSINSKPE----QQQALVIQRAFAGLSAMLHAAGEKPSYYDETHAAIVAVHDYAKA 900

Query: 874  ATTSDEVAK--VFDVDSQLTKANQD----LLQQARELPAPLDVWVAGVAADVGSLAVKSA 927
               S +  K  +  V  + +    D    L + A  LP P++  V  VA     +    A
Sbjct: 901  VQGSPDRGKAALHAVHQRFSMTGHDPIGTLQRVATGLPEPINHHVRKVAHQTAQVLNVEA 960

Query: 928  RSRIAELWTADSASLCSSIVTGRYPFDRASSRDVAIADFTRLFAPTGVFQSFFKQRMEPF 987
               +   W A+  S     +  RYPF    + D ++ DF   F P G  Q F  Q ++ F
Sbjct: 961  LRELERRWDAEVYSFFQQRLAERYPF-VVRAPDASLEDFEAFFGPNGRLQQFQDQYLKLF 1019

Query: 988  VDKTTTPWSWKGTFGAAGIPSSAVAQFENADKISRAFFPNGSETPTVSINVKPVSLTNAS 1047
            + K        G  G + I +  + Q E AD+I   FF       +V  +++P+ L+   
Sbjct: 1020 L-KDNLEALQNGLQGRSLIRTDVIEQLERADRIRETFFDQRGNL-SVQFSIEPLGLSANQ 1077

Query: 1048 SAVMLEIEGERVVYYHGPIQAKSITWPSRENTASLSRIA-FQPGGWQQAKTENGDWSPFR 1106
               +L+++G+ + Y HGP Q   I WP+       S +   +  G   +    G WS FR
Sbjct: 1078 RTSLLDLDGQLISYTHGPSQITGIVWPNTLGQHVRSNLTLLRQNGNSSSLEYRGPWSMFR 1137

Query: 1107 LFDGANIENQSGELLRVRFENGVQAAEFDIQFGSVLNPFKLDAIASFACP 1156
            L     +  ++   + + F+ G     + +      NP        F  P
Sbjct: 1138 LLSRGALNGRTATSVDLSFKTGDGVMRYRLNAEKAFNPITQQPFKGFRLP 1187