Pairwise Alignments

Query, 1159 a.a., IcmF family protein from Agrobacterium fabrum C58

Subject, 1267 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  176 bits (447), Expect = 8e-48
 Identities = 165/571 (28%), Positives = 254/571 (44%), Gaps = 73/571 (12%)

Query: 26  LSLLWVIALCVVVWFYGYLIA-LGDFKPLGTVQARLIAIGIIVAVWLVYIIVTIYRGRKQ 84
           L LLW+ +L ++ W    L+  L    P         A+ II A +L+ I++  Y+  + 
Sbjct: 15  LPLLWLASL-LICWLAAPLVPWLRHHVPE--------ALAIISACFLLVIVLRQYQRIRA 65

Query: 85  DKELVD--SIEREALANRQAEIGEIQT---RLKEALALLRRVTKKRFG---YIYDLPWYV 136
           +  L +   IE +   N   E  + Q    RLK A+ +LR       G    + DLPWY+
Sbjct: 66  EHNLENLLQIEVDRSWNATGEFRDQQVLRERLKHAITMLRTDRSAGGGGKAALSDLPWYL 125

Query: 137 IFGAPGSGKTTALTNSGLQFPLGDALGENAVKGIGGTRNCNWWFADEAILIDTAGRYTTQ 196
           + G   +GKT+ LT+SGL   +  A    +     GT++C+W+F+ +A++IDTAGRY   
Sbjct: 126 VVGMSAAGKTSLLTHSGLSASIATANDSES-----GTQHCDWYFSPDAVMIDTAGRYLRD 180

Query: 197 DDLDGSSKAGWEGFLGLLRRYRRSQPINGALVTLSIPDLLNRDPEEQRQELRSIRQRLSE 256
           D     S + +  FL +LR+ R    ING ++ +S+P+LL  + +E+      +  R+ E
Sbjct: 181 DQ----SASEFSAFLRMLRKQRGKAAINGLVLVVSLPELLAANSDERNALAAQLVARVEE 236

Query: 257 LDEYLHARVPVYIVLTKADLLHGFVEFFDGFNKTDRQQVWGTTFKLDESYS---AENLPQ 313
             E L A  PVY++L+K D L GF + FDG +  +RQQ  G TF L E  +      L  
Sbjct: 237 YAECLDANPPVYLMLSKTDQLPGFSQAFDGLDLHERQQPLGMTFGLSEIRTNGLHAVLQT 296

Query: 314 RLTEEFELLQQRVDAMLIERLQQEQNAEIRGRIFRFPAELARLKDRLHEALAELCASSPL 373
           RL +    ++Q VDA +I        AE    +  FP   A L   L + L         
Sbjct: 297 RLKKLQAHIRQHVDAQMI-----ALGAEADSTLLNFPQYFAALSGVLEQFLEHFTRGHRG 351

Query: 374 IEAPLLRGVYFASGTQ-----------------------PETEKSPAASRTRRSYFLSRL 410
               LLRG+YF S  Q                        E       +   RSYF++  
Sbjct: 352 GAPLLLRGLYFTSALQNGQQLGQVYEDVIADEFALQAAYDEQAGHVGKALGNRSYFITDT 411

Query: 411 FKDVIFPEAALVTRDKRLSRRQLLVRRIAYAVSATAVAIVFTGWIFTYFANTQALAEADR 470
           F+ VIFP+  L+    RL R+      +    +AT   ++F GW    FAN +   ++ R
Sbjct: 412 FRQVIFPDRDLILYQSRLGRQAAFSPLLLGLAAAT--GLLFIGWQALSFANNRQWLDSLR 469

Query: 471 KLGAYEQLVQGIPVREVADAD-FLRILPALDNLRDVNSGFARERVWNVSF----GLDQED 525
              A+        + + AD +  L     L+ LR+  +     R+  V      GL Q +
Sbjct: 470 GQLAH--------IEQAADREQQLAAGKGLEVLREQMANVKAHRLQGVPLQLGGGLYQGE 521

Query: 526 KIAGRQRDAYQRALNALLLPRMIVQLQKQLK 556
            I    R AY   L +  L  +   LQ Q++
Sbjct: 522 AIHQVTRSAYLAQLRSQALEPIARSLQVQMR 552



 Score = 28.1 bits (61), Expect = 0.005
 Identities = 14/56 (25%), Positives = 23/56 (41%)

Query: 927  ARSRIAELWTADSASLCSSIVTGRYPFDRASSRDVAIADFTRLFAPTGVFQSFFKQ 982
            A  +IA+ W    A     ++  RYP   +S  + ++ D  R   P       FK+
Sbjct: 1035 AGEQIAKAWAQQIAKPWEQVMAHRYPIAGSSRNEASVKDLQRFVDPDSGLLPAFKR 1090