Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 318 a.a., Transcriptional regulator of various polyols utilization, AraC family from Variovorax sp. SCN45

 Score =  135 bits (340), Expect = 1e-36
 Identities = 82/260 (31%), Positives = 138/260 (53%), Gaps = 8/260 (3%)

Query: 30  WHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLLGPNLPHAWQSHGLINAPGVHRAVV 89
           WH+H ++EL L   ++G  F+GD +  +  G LVL GP LPH W S  +       R  V
Sbjct: 53  WHFHEDYELHLITETSGKAFIGDWIGPFQPGHLVLCGPRLPHNWISLDVPEGGAAGRDRV 112

Query: 90  CWFTRDWIEGLIALTPELSAITPLLVESGHGI-CFGEDALAKVG-ERLATLHKIAPEQQI 147
             F  + IE   A  PEL  +  LL  + HGI  FG    A+   +R+     +   +++
Sbjct: 113 IQFRHEPIESAAAGIPELREVMQLLERARHGIEFFGMSQQAQAHWDRIKAARGV---RRL 169

Query: 148 LTLLGVLVDLARVSDRRPLSAGEVTASTAPRDRARMQRV---LNHIHAHYIGTISIKPLS 204
              L  + DLA+ +D R LS+ ++  +      A++ ++   +N I  +    IS+  ++
Sbjct: 170 GLFLDFMADLAQCTDYRLLSSVQMQGAQGADGDAQVDQINGIVNRITNNMADPISMSDVA 229

Query: 205 EIAHLSDSQLQRLFKRSTRMTISQYIGQLRVGGACRLLAQTDLSLARIAEETGFSDAAHF 264
               +S+S+  R F+RST  + + ++ ++R+  AC LL QTD  +  I  + GF++ A+F
Sbjct: 230 AELGMSESRFSRFFRRSTGNSFTDFVNRVRINSACHLLMQTDHYVTDICYQVGFNNVANF 289

Query: 265 SRQFRAARGMTPGDYRRQFD 284
           +R+F   +GMTP ++RRQ D
Sbjct: 290 NRRFLEIKGMTPSEFRRQAD 309