Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 301 a.a., HTH-type transcriptional activator RhaS from Pseudomonas sp. DMC3

 Score =  131 bits (330), Expect = 2e-35
 Identities = 80/256 (31%), Positives = 136/256 (53%), Gaps = 7/256 (2%)

Query: 30  WHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLLGPNLPHAWQSHGLINAPGVHRAVV 89
           WH+H E+EL L + S+G  F+GD + N+    L L GPNLPH W S    +     R ++
Sbjct: 37  WHFHKEYELHLIVASSGKVFIGDYIGNFYPETLFLTGPNLPHNWISQIAEDEVVEKRDML 96

Query: 90  CWFTRDWIEGLIALTPELSAITPLLVESGHGICFGEDALAKVGERLATLHKIAPEQQILT 149
             FT +  E    +  EL ++ PLL  + +GI F       + + +  + +IA    I T
Sbjct: 97  VNFTDELFESGHQVFAELKSLAPLLERAQYGIEFR--CKRTIRQAMTLMQRIADSTGI-T 153

Query: 150 LLG---VLVDLARVSDRRPLSAGEVTASTAPRDRA-RMQRVLNHIHAHYIGTISIKPLSE 205
            LG   +L++L   SD   L +G  T   A      R  R +++I +HY   IS++ ++ 
Sbjct: 154 RLGHFFILMELLAASDDFQLLSGATTPQLADEHNIDRTNRAVDYIFSHYARDISLEEVAV 213

Query: 206 IAHLSDSQLQRLFKRSTRMTISQYIGQLRVGGACRLLAQTDLSLARIAEETGFSDAAHFS 265
              ++ +   R+FK++T     +++ +LR+  +C LLA  D  +  +  E+GF++ ++F+
Sbjct: 214 HLGMTPTYFSRVFKQATGRNFIEFVNRLRISKSCELLADGDKPVTEVCFESGFNNISNFN 273

Query: 266 RQFRAARGMTPGDYRR 281
           R+F+  +GMTP  YRR
Sbjct: 274 RRFQQLKGMTPSHYRR 289