Pairwise Alignments

Query, 282 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

Subject, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 12/261 (4%)

Query: 13  FAMPAGENPTVAMIEAAYQHHGLNWRYINLEVSPENLKDAVAGARAMGWAGFNCSIPHKV 72
           F  P G + +  +     +  G +  Y  L    +   D   G    G +G N ++P K 
Sbjct: 7   FGNPIGHSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFKQG-SGGNVTVPFKE 65

Query: 73  AVIQHLDGLGESAEIIGAVNTIVRRGD-RLIGENTDGKGFVKAL--RDVIDPKDKKVVLF 129
              +  D L   A   GAVNT+ +  D  L G+NTDG G V+ L     ++   K++++ 
Sbjct: 66  EAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNAGVELAGKRILIL 125

Query: 130 GAGGAARAVCVEVALAGAAHITVVNRNRERGETVARLIDEKTPATATFAAWEDAFAIPEE 189
           GAGGA R V   +       + + NR  E+ E +AR  DE  P  A+  AW     + E 
Sbjct: 126 GAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDELGPVVASGFAW-----LQEP 180

Query: 190 TDIVIHATSVGLYPDIDGLPDIDLKTLRPSMVVADGIHNPPRTRLIR-AAEAAGSKTADG 248
            D++I+ATS  L  ++  + D  ++  R   V  D ++    T   + A +   +K  DG
Sbjct: 181 VDVIINATSASLAGELPPIADSLVEAGR--TVCYDMMYGKEPTPFCQWATKLGAAKVLDG 238

Query: 249 LGMLVNQGVIGIKYWTGVDVD 269
           LGML  Q       W GV  D
Sbjct: 239 LGMLAEQAAEAFFIWRGVRPD 259